RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SRP9P49458 86 aaKnown RBP18.61■□□□□ 0.57
LINC01960-201ENST00000563759 TMEM50BP56557 158 aa18.61■□□□□ 0.57
LINC01960-201ENST00000563759 MPPED2Q15777 294 aa18.61■□□□□ 0.57
LINC01960-201ENST00000563759 TLNRD1Q9H1K6 362 aa18.61■□□□□ 0.57
LINC01960-201ENST00000563759 DOPEY1Q5JWR5 2465 aa18.61■□□□□ 0.57
LINC01960-201ENST00000563759 ARFGEF3Q5TH69 2177 aa18.61■□□□□ 0.57
LINC01960-201ENST00000563759 hCG_1807616A0A1W2PRN6 198 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 FOXI3A8MTJ6 420 aaPredicted RBP18.6■□□□□ 0.57
LINC01960-201ENST00000563759 OR7C1O76099 320 aaPredicted RBP18.6■□□□□ 0.57
LINC01960-201ENST00000563759 PTTG1O95997 202 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 TNFSF4P23510 183 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 ARL6IP1Q15041 203 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 FAM58AQ8N1B3 248 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 RHOFQ9HBH0 211 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 PLEKHJ1Q9NW61 149 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 CISD1Q9NZ45 108 aaKnown RBP18.6■□□□□ 0.57
LINC01960-201ENST00000563759 RBMX2Q9Y388 322 aaKnown RBP18.6■□□□□ 0.57
LINC01960-201ENST00000563759 USP9XQ93008 2570 aaPredicted RBP18.6■□□□□ 0.57
LINC01960-201ENST00000563759 H7C417 338 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 M0R233 179 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 SULT1C2O00338 296 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 MFNGO00587 321 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 RBBP9O75884 186 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 PGA5P0DJD9 388 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 GNG2P59768 71 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 NHLRC3Q5JS37 347 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 DNM1P46Q6ZS02 220 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 ZNF826PQ6ZT77 177 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 GPX8Q8TED1 209 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 CHPT1Q8WUD6 406 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 NUDCD2Q8WVJ2 157 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 SEH1LQ96EE3 360 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 COX4I2Q96KJ9 171 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 NEDD4LQ96PU5 975 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 IL36RNQ9UBH0 155 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 MTFP1Q9UDX5 166 aa18.6■□□□□ 0.57
LINC01960-201ENST00000563759 NXPH2O95156 264 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 IGHV1-46P01743 117 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 APOBEC3AP31941 199 aaPredicted RBP18.59■□□□□ 0.57
LINC01960-201ENST00000563759 AP3S2P59780 193 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 ACTBP60709 375 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 GMFBP60983 142 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 ACTG1P63261 375 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 OLFML2AQ68BL7 652 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 C6orf201Q7Z4U5 140 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 CENPSQ8N2Z9 138 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 MEGF10Q96KG7 1140 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 PECRQ9BY49 303 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 C11orf54Q9H0W9 315 aaPredicted RBP18.59■□□□□ 0.57
LINC01960-201ENST00000563759 OCEL1Q9H607 264 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 C1orf123Q9NWV4 160 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 ZNF581Q9P0T4 197 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 CHD6Q8TD26 2715 aa18.59■□□□□ 0.57
LINC01960-201ENST00000563759 PLA2G10O15496 165 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 LYRM1O43325 122 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 ECDO95905 644 aaPredicted RBP18.58■□□□□ 0.57
LINC01960-201ENST00000563759 MELTFP08582 738 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 TNFAIP6P98066 277 aaPredicted RBP18.58■□□□□ 0.57
LINC01960-201ENST00000563759 PCGF3Q3KNV8 242 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 ZNF672Q499Z4 452 aaPredicted RBP18.58■□□□□ 0.57
LINC01960-201ENST00000563759 SIGIRRQ6IA17 410 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 WDR82Q6UXN9 313 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 TRAPPC6BQ86SZ2 158 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 C11orf53Q8IXP5 236 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 CELF2-AS1Q8N7Q2 184 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 NRIP2Q9BQI9 281 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 KCNK7Q9Y2U2 307 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 DYSFO75923 2080 aa18.58■□□□□ 0.57
LINC01960-201ENST00000563759 FAM90A10PA6NDY2 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A18PA6NE21 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A16PA6NEW6 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A20PA6NIJ5 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A8PA6NJQ4 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A7PA6NKC0 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 SERPINE3A8MV23 424 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A22PA8MWA6 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A12PA8MX19 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A5PA8MXJ8 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A23PA8MXZ1 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 PYCARD-AS1I3L0S3 204 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 C19orf84I3L1E1 186 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A15PP0C7V4 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A13PP0C7W8 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A14PP0C7W9 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 FAM90A24PP0C7X0 464 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 GSTT2BP0CG30 244 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 IKZF1Q13422 519 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 ARFRP1Q13795 201 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 OXA1LQ15070 435 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 PDCD1Q15116 288 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 PNLIPRP3Q17RR3 467 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 MZT2BQ6NZ67 158 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 MINDY2Q8NBR6 621 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 POC1AQ8NBT0 407 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 ITLN1Q8WWA0 313 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 POM121Q96HA1 1249 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 TMEM204Q9BSN7 226 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 DYNLRB1Q9NP97 96 aa18.58■□□□□ 0.56
LINC01960-201ENST00000563759 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.58■□□□□ 0.56
LINC01960-201ENST00000563759 IL19Q9UHD0 177 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms