RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 UFSP2Q9NUQ7 469 aa16.34■□□□□ 0.21
SPSB3-204ENST00000563741 TRAV18A0A075B6X5 111 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 C17orf100A8MU93 164 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 SCGNO76038 276 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 CPT2P23786 658 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 FAM189A2Q15884 450 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 WDR82Q6UXN9 313 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 OR51T1Q8NGJ9 327 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 ITLN1Q8WWA0 313 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 NRGNQ92686 78 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 GCDHQ92947 438 aaPredicted RBP16.33■□□□□ 0.21
SPSB3-204ENST00000563741 NRIP2Q9BQI9 281 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 PCDHB16Q9NRJ7 776 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 RABL2AQ9UBK7 228 aaPredicted RBP16.33■□□□□ 0.21
SPSB3-204ENST00000563741 EDARQ9UNE0 448 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 RABL2BQ9UNT1 228 aa16.33■□□□□ 0.21
SPSB3-204ENST00000563741 FOXI3A8MTJ6 420 aaPredicted RBP16.33■□□□□ 0.2
SPSB3-204ENST00000563741 C3orf80F5H4A9 247 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 TPPPO94811 219 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 PGA5P0DJD9 388 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 PTHLHP12272 177 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 SRP9P49458 86 aaKnown RBP16.33■□□□□ 0.2
SPSB3-204ENST00000563741 RBM11P57052 281 aaKnown RBP16.33■□□□□ 0.2
SPSB3-204ENST00000563741 FGF12P61328 243 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 ERVK11-1P61568 191 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 TNFAIP6P98066 277 aaPredicted RBP16.33■□□□□ 0.2
SPSB3-204ENST00000563741 IFITM3Q01628 133 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 BAK1Q16611 211 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 SWI5Q1ZZU3 235 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 C16orf87Q6PH81 154 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 RTN4RL2Q86UN3 420 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 ZCCHC24Q8N2G6 241 aaKnown RBP16.33■□□□□ 0.2
SPSB3-204ENST00000563741 Q8N402 240 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 OR56B1Q8NGI3 324 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 OR10R2Q8NGX6 335 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 FBXW5Q969U6 566 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 DIRC2Q96SL1 478 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 NUDT16L1Q9BRJ7 211 aaKnown RBP16.33■□□□□ 0.2
SPSB3-204ENST00000563741 PALMDQ9NP74 551 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 IL36RNQ9UBH0 155 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 IL19Q9UHD0 177 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 AKAP6Q13023 2319 aa16.33■□□□□ 0.2
SPSB3-204ENST00000563741 SOCS1O15524 211 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 UPK1BO75841 260 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 CHRM2P08172 466 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 CD55P08174 381 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 TNFSF4P23510 183 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 GATA4P43694 442 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 PITPNAQ00169 270 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 TAF9Q16594 264 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 NHLRC3Q5JS37 347 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 DYNLRB1Q9NP97 96 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 ZNF581Q9P0T4 197 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 ST3GAL6Q9Y274 331 aa16.32■□□□□ 0.2
SPSB3-204ENST00000563741 GEMIN2O14893 280 aaKnown RBP16.31■□□□□ 0.2
SPSB3-204ENST00000563741 CTDSPLO15194 276 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 AKR7A2O43488 359 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 NOS1APO75052 506 aaPredicted RBP16.31■□□□□ 0.2
SPSB3-204ENST00000563741 CSF3P09919 207 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 GABRR1P24046 479 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 PLAC9Q5JTB6 97 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 Q8IYB0 196 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 POC1AQ8NBT0 407 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 CYYR1Q96J86 154 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 PLEKHF2Q9H8W4 249 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 ZMAT3Q9HA38 289 aaKnown RBP16.31■□□□□ 0.2
SPSB3-204ENST00000563741 RHOFQ9HBH0 211 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 ABCB10Q9NRK6 738 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 C1orf123Q9NWV4 160 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 HS3ST1O14792 307 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 ACAA1P09110 424 aaPredicted RBP16.31■□□□□ 0.2
SPSB3-204ENST00000563741 IL7P13232 177 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 TMEM50BP56557 158 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 CCL8P80075 99 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 DGCR2P98153 550 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 HOXA4Q00056 320 aaPredicted RBP16.31■□□□□ 0.2
SPSB3-204ENST00000563741 FAM209AQ5JX71 171 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 SIGIRRQ6IA17 410 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 MOGAT3Q86VF5 341 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 OR8H2Q8N162 312 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 FAM58AQ8N1B3 248 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 SMIM4Q8WVI0 70 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 EMG1Q92979 244 aaKnown RBP16.31■□□□□ 0.2
SPSB3-204ENST00000563741 RAB3CQ96E17 227 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 LIME1Q9H400 295 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 AUNIPQ9H7T9 357 aa16.31■□□□□ 0.2
SPSB3-204ENST00000563741 ARFGEF3Q5TH69 2177 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 MYO9AB2RTY4 2548 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 PRKACAP17612 351 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 RBMXP38159 391 aaKnown RBP16.3■□□□□ 0.2
SPSB3-204ENST00000563741 SNU13P55769 128 aaKnown RBP16.3■□□□□ 0.2
SPSB3-204ENST00000563741 SNRPD2P62316 118 aaKnown RBP16.3■□□□□ 0.2
SPSB3-204ENST00000563741 ZNF260Q3ZCT1 412 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 CHST4Q8NCG5 386 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 C15orf40Q8WUR7 153 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 NINJ1Q92982 152 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 TRIM63Q969Q1 353 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 MS4A5Q9H3V2 200 aa16.3■□□□□ 0.2
SPSB3-204ENST00000563741 FN3KRPQ9HA64 309 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms