RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 KLF17Q5JT82 389 aaPredicted RBP13.68□□□□□ -0.22
CDT1-202ENST00000562747 RNLSQ5VYX0 342 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 DMKNQ6E0U4 476 aaPredicted RBP13.68□□□□□ -0.22
CDT1-202ENST00000562747 SLC25A26Q70HW3 274 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 ZNF561Q8N587 486 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 ZDHHC22Q8N966 263 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 LY6G5BQ8NDX9 201 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 C8orf46Q8TAG6 207 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 RGP1Q92546 391 aaPredicted RBP13.68□□□□□ -0.22
CDT1-202ENST00000562747 SLAMF9Q96A28 289 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 DCTN5Q9BTE1 182 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 ERGIC3Q9Y282 383 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 ZNF281Q9Y2X9 895 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 MAB21L2Q9Y586 359 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 SIRT4Q9Y6E7 314 aaPredicted RBP13.68□□□□□ -0.22
CDT1-202ENST00000562747 TRRAPQ9Y4A5 3859 aa13.68□□□□□ -0.22
CDT1-202ENST00000562747 SULT1B1O43704 296 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 PLATP00750 562 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 TFF1P04155 84 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 CDK1P06493 297 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 FPR2P25090 351 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 PRDX2P32119 198 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 POU3F4P49335 361 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 ZNF529Q6P280 563 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 CD177Q8N6Q3 437 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 NANOGP1Q8N7R0 232 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 ZNRF1Q8ND25 227 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 MYDGFQ969H8 173 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 CNTD2Q9H8S5 307 aa13.67□□□□□ -0.22
CDT1-202ENST00000562747 PTGES3LE9PB15 166 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 TOX4O94842 621 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 MMP9P14780 707 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 NDUFB7P17568 137 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 RAB3AP20336 220 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 SOX2P48431 317 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 PDZK1IP1Q13113 114 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 YIF1BQ5BJH7 314 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 METTL11BQ5VVY1 283 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 BATF2Q8N1L9 274 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 BPIFB2Q8N4F0 458 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 TMEM185AQ8NFB2 350 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 H1FXQ92522 213 aaKnown RBP13.66□□□□□ -0.22
CDT1-202ENST00000562747 GHSRQ92847 366 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 TMEM106AQ96A25 262 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 CPNE2Q96FN4 548 aaPredicted RBP13.66□□□□□ -0.22
CDT1-202ENST00000562747 PGLYRP3Q96LB9 341 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 WDFY2Q96P53 400 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 MND1Q9BWT6 205 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 SUCNR1Q9BXA5 334 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 CDCA4Q9BXL8 241 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 TPRKBQ9Y3C4 175 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 PCDHGB5Q9Y5G0 923 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 KPTNQ9Y664 436 aa13.66□□□□□ -0.22
CDT1-202ENST00000562747 TRAV40A0A0B4J280 105 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 F8VVB4 439 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 F8VWA3 439 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 CD1AP06126 327 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 HCKP08631 526 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 VHLP40337 213 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 UBA52P62987 128 aaKnown RBP13.65□□□□□ -0.22
CDT1-202ENST00000562747 SLC35A2P78381 396 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 BDH1Q02338 343 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 FIP1L1Q6UN15 594 aaKnown RBP13.65□□□□□ -0.22
CDT1-202ENST00000562747 SAXO1Q8IYX7 474 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 KIR3DL3Q8N743 410 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 C22orf15Q8WYQ4 148 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 EMG1Q92979 244 aaKnown RBP13.65□□□□□ -0.22
CDT1-202ENST00000562747 JMJD8Q96S16 334 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 PCGF1Q9BSM1 259 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 SIRPDQ9H106 197 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 SEBOXQ9HB31 216 aaPredicted RBP13.65□□□□□ -0.22
CDT1-202ENST00000562747 RHOFQ9HBH0 211 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 OR14J1Q9UGF5 321 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 RAB26Q9ULW5 256 aa13.65□□□□□ -0.22
CDT1-202ENST00000562747 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 TRBV5-5A0A0J9YX44 114 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 MAGEB3O15480 346 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 CHRM2P08172 466 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 IGHV4-38-2P0DP08 117 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 BCL3P20749 454 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 CEBPDP49716 269 aaPredicted RBP13.64□□□□□ -0.23
CDT1-202ENST00000562747 CAPZA1P52907 286 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 BPIFB3P59826 476 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 ARF6P62330 175 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 ACSM1Q08AH1 577 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 PDCD1Q15116 288 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 KISS1Q15726 138 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 TUSC1Q2TAM9 212 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 PRR31Q5SQ13 230 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 CRIP3Q6Q6R5 217 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 C9orf139Q6ZV77 190 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 CMTM4Q8IZR5 234 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 ZFP41Q8N8Y5 198 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 ZSCAN4Q8NAM6 433 aaPredicted RBP13.64□□□□□ -0.23
CDT1-202ENST00000562747 RFT1Q96AA3 541 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 SPACA5Q96QH8 159 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
CDT1-202ENST00000562747 MS4A7Q9GZW8 240 aaPredicted RBP13.64□□□□□ -0.23
CDT1-202ENST00000562747 FAM234AQ9H0X4 552 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms