RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 MED4Q9NPJ6 270 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CTPS2Q9NRF8 586 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 NRBP2Q9NSY0 501 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GPATCH2LQ9NWQ4 482 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 MCUBQ9NWR8 336 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 MS4A12Q9NXJ0 267 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 GIN1Q9NXP7 522 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 NAGKQ9UJ70 344 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 C3orf18Q9UK00 162 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 FADS3Q9Y5Q0 445 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 V9GYY9 64 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 DMXL2Q8TDJ6 3036 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 CEP295Q9C0D2 2601 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 RP1P56715 2156 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 PTPRQQ9UMZ3 2332 aa1.72□□□□□ -2.13
HDGFL3-202ENST00000562702 DOPEY2Q9Y3R5 2298 aa1.71□□□□□ -2.13
HDGFL3-202ENST00000562702 COL27A1Q8IZC6 1860 aaPredicted RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SPEGQ15772 3267 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ANKRD11Q6UB99 2663 aaPredicted RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ZFC3H1O60293 1989 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 NAV2Q8IVL1 2488 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SPAARA0A1B0GVQ0 90 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 PRSS37A4D1T9 235 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 GOLGA6L10A6NI86 522 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 TMEM114B3SHH9 223 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LRRN3E7EW58 273 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 PRAMEF26H0Y7S4 382 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 RNASEK-C17orf49H0YIS7 233 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 H7C2Y5 167 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 M0R036 132 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 GOSR2O14653 212 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 EIF3HO15372 352 aaKnown RBP eCLIP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 AQP9O43315 295 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ENTPD5O75356 428 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 DEXIO95424 95 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SNAP29O95721 258 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 TMEM50AO95807 157 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 IGLV2-23P01705 113 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 TNNC2P02585 160 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CSF3P09919 207 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 OR4Q2P0C623 313 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CISD3P0C7P0 127 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 NQO1P15559 274 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 RAB4AP20338 218 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CNR1P21554 472 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 IL32P24001 234 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 GABRR2P28476 465 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 HOXA6P31267 233 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ARL2P36404 184 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 UGT2B10P36537 528 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CSKP41240 450 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ACTR1BP42025 376 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 QARSP47897 775 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CXCL12P48061 93 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 GSSP48637 474 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 TMED10P49755 219 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 XKP51811 444 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ARPP19P56211 112 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 MLF1P58340 268 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 TAS2R60P59551 318 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 OR2B8PP59922 312 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 UBE2G2P60604 165 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ADARB1P78563 741 aaKnown RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 IRF8Q02556 426 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SCRN3Q0VDG4 424 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 KLRB1Q12918 225 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 OR5I1Q13606 314 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 MOBPQ13875 183 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ITIH4Q14624 930 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 GNMTQ14749 295 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 OR4D1Q15615 310 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 PSMD5Q16401 504 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LY6EQ16553 131 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 GUCA2BQ16661 112 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ATP6V1FQ16864 119 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 RSPO1Q2MKA7 263 aaPredicted RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ABCA11PQ4W5N1 156 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 PDZD11Q5EBL8 140 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LY6G6FQ5SQ64 297 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SPOPLQ6IQ16 392 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LCN12Q6JVE5 192 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 NANOGP8Q6NSW7 305 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 FAM173BQ6P4H8 233 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 IGFL1Q6UW32 110 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LYPD2Q6UXB3 125 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CERS6Q6ZMG9 384 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 OR2W3Q7Z3T1 314 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 APRG1Q8IVJ8 170 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 FUNDC1Q8IVP5 155 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 DEFB119Q8N690 84 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 C8orf31Q8N9H6 132 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 SDR9C7Q8NEX9 313 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LYPD6BQ8NI32 183 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 UBA3Q8TBC4 463 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 LGALS14Q8TCE9 139 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ACTRT1Q8TDG2 376 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 CXorf40AQ8TE69 158 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 ZFP90Q8TF47 636 aa1.71□□□□□ -2.14
HDGFL3-202ENST00000562702 FRZBQ92765 325 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms