RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 NICN1Q9BSH3 213 aa8.75□□□□□ -1.01
USP3-219ENST00000561326 FGF23Q9GZV9 251 aaPredicted RBP8.75□□□□□ -1.01
USP3-219ENST00000561326 TLNRD1Q9H1K6 362 aa8.75□□□□□ -1.01
USP3-219ENST00000561326 SPACA1Q9HBV2 294 aa8.75□□□□□ -1.01
USP3-219ENST00000561326 FAIMQ9NVQ4 179 aa8.75□□□□□ -1.01
USP3-219ENST00000561326 RASL12Q9NYN1 266 aa8.75□□□□□ -1.01
USP3-219ENST00000561326 HSF4Q9ULV5 492 aa8.75□□□□□ -1.01
USP3-219ENST00000561326 KMT2BQ9UMN6 2715 aaPredicted RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 A0A1W2PQ09 198 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 hCG_1807616A0A1W2PRN6 198 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 ZSCAN5BA6NJL1 495 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 C17orf100A8MU93 164 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 SERPINE3A8MV23 424 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 DEFB108AA8MXU0 73 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 H7C417 338 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 SH2D1BO14796 132 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 ORC5O43913 435 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 NXPH2O95156 264 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 GOSR1O95249 250 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 PTBP3O95758 552 aaKnown RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 PGA5P0DJD9 388 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 HIST1H1DP16402 221 aaKnown RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 GNB3P16520 340 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 PRKACAP17612 351 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 FUT3P21217 361 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 CFHR2P36980 270 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 CBX5P45973 191 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 NPBWR2P48146 333 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 GNG2P59768 71 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 ACTBP60709 375 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 ACTG1P63261 375 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 MRPS15P82914 257 aaKnown RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 DGCR2P98153 550 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 IFITM3Q01628 133 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 MAB21L1Q13394 359 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 ASAH1Q13510 395 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 ARFRP1Q13795 201 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 DAZAP2Q15038 168 aaPredicted RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 EFNB3Q15768 340 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 TAF9Q16594 264 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 PCGF3Q3KNV8 242 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 MOGAT2Q3SYC2 334 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 OR11L1Q8NGX0 322 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 OR10Z1Q8NGY1 313 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 OR52I2Q8NH67 350 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 DEDD2Q8WXF8 326 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 EMG1Q92979 244 aaKnown RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 YIPF5Q969M3 257 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 MEGF10Q96KG7 1140 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 OR2V2Q96R30 315 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 TMEM204Q9BSN7 226 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 DYNLRB1Q9NP97 96 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.74□□□□□ -1.011e-7■□□□□ 9.5
USP3-219ENST00000561326 DECR2Q9NUI1 292 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 UFSP2Q9NUQ7 469 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 MTFP1Q9UDX5 166 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 KLF2Q9Y5W3 355 aaPredicted RBP8.74□□□□□ -1.01
USP3-219ENST00000561326 ZNF462Q96JM2 2506 aa8.74□□□□□ -1.01
USP3-219ENST00000561326 DOCK11Q5JSL3 2073 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 LINC00854A0A1B0GVQ3 168 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 WIPF3A6NGB9 483 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 CA11O75493 328 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 RHBDL1O75783 438 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 OR7C1O76099 320 aaPredicted RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 PLAUP00749 431 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 IGHV1-46P01743 117 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 GLAP06280 429 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 CSF1P09603 554 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 CD3GP09693 182 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 FAUP35544 74 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 PMELP40967 661 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 GATA4P43694 442 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 TMEM50BP56557 158 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 IL13RA2Q14627 380 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 TRIM16LQ309B1 348 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 PIGYQ3MUY2 71 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 RNASE12Q5GAN4 147 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 FAM209AQ5JX71 171 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 ATAD3CQ5T2N8 411 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 MEX3BQ6ZN04 569 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 DNM1P46Q6ZS02 220 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 WDR86Q86TI4 376 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 C11orf53Q8IXP5 236 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 POC1AQ8NBT0 407 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 GPX8Q8TED1 209 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 FBXW5Q969U6 566 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 SEH1LQ96EE3 360 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 ARHGAP5-AS1Q96IT6 56 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 NRIP2Q9BQI9 281 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 C7orf50Q9BRJ6 194 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 PECRQ9BY49 303 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 ZMAT3Q9HA38 289 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 IFT46Q9NQC8 304 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 RBFOX1Q9NWB1 397 aaKnown RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 C1orf123Q9NWV4 160 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 KLK11Q9UBX7 282 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 ZNF107Q9UII5 783 aaPredicted RBP8.73□□□□□ -1.01
USP3-219ENST00000561326 FLNCQ14315 2725 aa8.73□□□□□ -1.01
USP3-219ENST00000561326 KIAA2026Q5HYC2 2103 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms