RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MAB21L2Q9Y586 359 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
LMX1B-204ENST00000561065 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 TRBV2A0A0J9YWF9 115 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 EFCAB10A6NFE3 127 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 A6NIN4 97 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 CASQ2O14958 399 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-204ENST00000561065 MAGEB3O15480 346 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 SYNGR1O43759 233 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 CD2P06729 351 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 EEF1B2P24534 225 aaKnown RBP13.09□□□□□ -0.31
LMX1B-204ENST00000561065 PEX2P28328 305 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 PRDX2P32119 198 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 CAPGP40121 348 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 KIR3DL2P43630 455 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 SLC34A1Q06495 639 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 PRR31Q5SQ13 230 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 OGFRL1Q5TC84 451 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-204ENST00000561065 RPL22L1Q6P5R6 122 aaKnown RBP13.09□□□□□ -0.31
LMX1B-204ENST00000561065 METAP1DQ6UB28 335 aaPredicted RBP13.09□□□□□ -0.31
LMX1B-204ENST00000561065 RDH10Q8IZV5 341 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 PNKDQ8N490 385 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 TRMT10AQ8TBZ6 339 aaKnown RBP13.09□□□□□ -0.31
LMX1B-204ENST00000561065 NPRL2Q8WTW4 380 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 SSMEM1Q8WWF3 244 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 SDSLQ96GA7 329 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 TMEM80Q96HE8 168 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 RHOFQ9HBH0 211 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 AASSQ9UDR5 926 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 POMT1Q9Y6A1 747 aa13.09□□□□□ -0.31
LMX1B-204ENST00000561065 DSCAML1Q8TD84 2053 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 A0A1W2PQ09 198 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 OR4C45A6NMZ5 311 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 H0YHG0 523 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 ALX3O95076 343 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 KNG1P01042 644 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 CHRM2P08172 466 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 ATF1P18846 271 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 CEBPDP49716 269 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-204ENST00000561065 RAG2P55895 527 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 ADARB1P78563 741 aaKnown RBP13.08□□□□□ -0.32
LMX1B-204ENST00000561065 GUCA2AQ02747 115 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 SRSF4Q08170 494 aaKnown RBP13.08□□□□□ -0.32
LMX1B-204ENST00000561065 UBE2V2Q15819 145 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 BATF2Q8N1L9 274 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 ZSCAN4Q8NAM6 433 aaPredicted RBP13.08□□□□□ -0.32
LMX1B-204ENST00000561065 TMEM185AQ8NFB2 350 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 OR5D13Q8NGL4 314 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 WFDC12Q8WWY7 111 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 CEP19Q96LK0 163 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 FAM234AQ9H0X4 552 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 ZNRD1Q9P1U0 126 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 DIMT1Q9UNQ2 313 aaKnown RBP13.08□□□□□ -0.32
LMX1B-204ENST00000561065 DHDHQ9UQ10 334 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 MMP24Q9Y5R2 645 aa13.08□□□□□ -0.32
LMX1B-204ENST00000561065 A0A1W2PRD5 423 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 A0A1W2PRF3 423 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 A0A1W2PRM7 423 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 H0YJX3 145 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 H3BSH0 61 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 WBP4O75554 376 aaKnown RBP13.07□□□□□ -0.32
LMX1B-204ENST00000561065 MT-ND2P03891 347 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 IER3P46695 156 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 TAF9Q16594 264 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 HCP5Q6MZN7 132 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 ANGPTL5Q86XS5 388 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 CD177Q8N6Q3 437 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 PPP1R35Q8TAP8 253 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 TSEN15Q8WW01 171 aaKnown RBP13.07□□□□□ -0.32
LMX1B-204ENST00000561065 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
LMX1B-204ENST00000561065 NRIP2Q9BQI9 281 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 ZCCHC4Q9H5U6 513 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
LMX1B-204ENST00000561065 POM121CA8CG34 1229 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 M0R1W7 72 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 GPR137BO60478 399 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 NDUFA7O95182 113 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
LMX1B-204ENST00000561065 NANOS3P60323 173 aaKnown RBP13.06□□□□□ -0.32
LMX1B-204ENST00000561065 NCR3LG1Q68D85 454 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 SLC25A26Q70HW3 274 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 CALHM1Q8IU99 346 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 CNIH3Q8TBE1 160 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 GPR148Q8TDV2 347 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 APH1BQ8WW43 257 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 OPALINQ96PE5 141 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 SLITRK2Q9H156 845 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 ZNF696Q9H7X3 374 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 METTL8Q9H825 291 aaKnown RBP13.06□□□□□ -0.32
LMX1B-204ENST00000561065 ISG20L2Q9H9L3 353 aaKnown RBP13.06□□□□□ -0.32
LMX1B-204ENST00000561065 SEBOXQ9HB31 216 aaPredicted RBP13.06□□□□□ -0.32
LMX1B-204ENST00000561065 C19orf12Q9NSK7 152 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 CNOT2Q9NZN8 540 aaKnown RBP13.06□□□□□ -0.32
LMX1B-204ENST00000561065 FAM96BQ9Y3D0 163 aa13.06□□□□□ -0.32
LMX1B-204ENST00000561065 VWFP04275 2813 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
LMX1B-204ENST00000561065 NPFFO15130 113 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms