RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 F5H5P2 479 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 MLNRO43193 412 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 AKR7A2O43488 359 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 SSNA1O43805 119 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 SCGNO76038 276 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 GSTP1P09211 210 aaKnown RBP9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 PRKACAP17612 351 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 BTG1P62324 171 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 TIMM23BQ5SRD1 257 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF826PQ6ZT77 177 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 PXT1Q8NFP0 134 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 OR11H7Q8NGC8 314 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 OR13C8Q8NGS7 320 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 MRGPRFQ96AM1 343 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 PPP1R14BQ96C90 147 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 TECTBQ96PL2 329 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 OR51J1Q9H342 316 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 ZNF222Q9UK12 451 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 PLEKHA6Q9Y2H5 1048 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 ACACBO00763 2458 aa9.27□□□□□ -0.92
SNRPA1-211ENST00000560433 ATP6V1G2-DDX39BF2Z307 99 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 TIMM8AO60220 97 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF780AO75290 641 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 RAC2P15153 192 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 RBM11P57052 281 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 Q6ZR03 302 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 SYT3Q9BQG1 590 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 MED28Q9H204 178 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 OPA3Q9H6K4 179 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 UFSP2Q9NUQ7 469 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF69Q9UC07 566 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 MPC1Q9Y5U8 109 aa9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 CHD3Q12873 2000 aaKnown RBP9.27□□□□□ -0.93
SNRPA1-211ENST00000560433 TRAPPC2LH3BP13 241 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 HS3ST1O14792 307 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 TFF1P04155 84 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 CD74P04233 296 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 AMY2BP19961 511 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 CHATP28329 748 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 GNG3P63215 75 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 KLRB1Q12918 225 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF154Q13106 437 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 BAMBIQ13145 260 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 OR8G1Q15617 311 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 MPPED2Q15777 294 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 PRAMEF6Q5VXH4 476 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 WFDC8Q8IUA0 241 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 SCCPDHQ8NBX0 429 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 EMG1Q92979 244 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 TMPRSS13Q9BYE2 586 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF442Q9H7R0 627 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 PURGQ9UJV8 347 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 AMDHD2Q9Y303 409 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 PKDREJQ9NTG1 2253 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 PI3P19957 117 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 GCH1P30793 250 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 SSBP1Q04837 148 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 EIF2S3LQ2VIR3 472 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 Q6ZPA2 131 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 BOD1Q96IK1 185 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 CMSS1Q9BQ75 279 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 NUDT16L1Q9BRJ7 211 aaKnown RBP9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 OR51I2Q9H344 312 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 OSGIN2Q9Y236 505 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 VSIG4Q9Y279 399 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
SNRPA1-211ENST00000560433 C7orf66A4D0T2 115 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 IQCF6A8MYZ5 107 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 CRYAAP02489 173 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 IFNA6P05013 189 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 HOXD4P09016 255 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 NPY4RP50391 375 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 TSPAN5P62079 268 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 RBPJQ06330 500 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 MAB21L1Q13394 359 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 IKZF1Q13422 519 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 SPRNQ5BIV9 151 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 MKXQ8IYA7 352 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 FN3KRPQ9HA64 309 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 TMEM100Q9NV29 134 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 SERPINE3A8MV23 424 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 CEBPDP49716 269 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 FAM189A2Q15884 450 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 PNLIPRP3Q17RR3 467 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF718Q3SXZ3 478 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 C4orf46Q504U0 113 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 RGS7BPQ6MZT1 257 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 GLDNQ6ZMI3 551 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 MRGPRGQ86SM5 289 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 ZNF573Q86YE8 665 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 DRAXINQ8NBI3 349 aaPredicted RBP9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 OR8G5Q8NG78 346 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 MARCH1Q8TCQ1 289 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 RND1Q92730 232 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 RDH5Q92781 318 aa9.25□□□□□ -0.93
SNRPA1-211ENST00000560433 OCSTAMPQ9BR26 566 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms