RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DEFB112Q30KQ8 113 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 CCDC58Q4VC31 144 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 C16orf87Q6PH81 154 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 VMO1Q7Z5L0 202 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 PARP16Q8N5Y8 322 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 TMEM185AQ8NFB2 350 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 OR13C3Q8NGS6 347 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 FBLIM1Q8WUP2 373 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 GATAD2BQ8WXI9 593 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 TNFRSF14Q92956 283 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 FAM234AQ9H0X4 552 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 NOX4Q9NPH5 578 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 ONECUT1Q9UBC0 465 aa12.46□□□□□ -0.41
SNRPA1-210ENST00000560383 GNAO1P09471 354 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 MTCP1P56278 107 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 RUSC1-AS1Q66K80 236 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 LAIR2Q6ISS4 152 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 CRIP3Q6Q6R5 217 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 SLC25A26Q70HW3 274 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 Q8IYB0 196 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 TMEM86BQ8N661 226 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 OR5AK2Q8NH90 309 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 LHX4Q969G2 390 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 OPALINQ96PE5 141 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 PDCD1LG2Q9BQ51 273 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 COMMD4Q9H0A8 199 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 EXOSC1Q9Y3B2 195 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 MMP24Q9Y5R2 645 aa12.45□□□□□ -0.42
SNRPA1-210ENST00000560383 CMYA5Q8N3K9 4069 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 TRBV2A0A0J9YWF9 115 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 A0A1B0GUS0 222 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 MDFIC2A0A1B0GVS7 189 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 K7N7A8 449 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 ZNF737O75373 536 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 PIPP12273 146 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 CEBPDP49716 269 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 RPL15P61313 204 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 PDZK1IP1Q13113 114 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 CDK5R1Q15078 307 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 OR2G6Q5TZ20 316 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 XAF1Q6GPH4 301 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 ZNF529Q6P280 563 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 RPL22L1Q6P5R6 122 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 Q6YL49 198 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 TMPRSS11AQ6ZMR5 421 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 MKXQ8IYA7 352 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 C8orf59Q8N0T1 100 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 ZNF485Q8NCK3 441 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 RGP1Q92546 391 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 TFAP2CQ92754 450 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 GGHQ92820 318 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 SLAMF9Q96A28 289 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 TMEM80Q96HE8 168 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 ZCCHC4Q9H5U6 513 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 METTL8Q9H825 291 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 ELL3Q9HB65 397 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 C19orf12Q9NSK7 152 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 CNOT2Q9NZN8 540 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 NKX1-2Q9UD57 310 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-210ENST00000560383 A0A1W2PQ09 198 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 RNASEK-C17orf49H0YIS7 233 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 OGG1O15527 345 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 TK1P04183 234 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 CHRM2P08172 466 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 MYL12AP19105 171 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 CAPZA1P52907 286 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 SERPINA12Q8IW75 414 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 OR5D14Q8NGL3 314 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 OR13C9Q8NGT0 318 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 OR52N1Q8NH53 320 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 TBC1D15Q8TC07 691 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 VCXQ9H320 206 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 BABAM2Q9NXR7 383 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 CLEC2DQ9UHP7 191 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 DHDHQ9UQ10 334 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
SNRPA1-210ENST00000560383 EFCAB10A6NFE3 127 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 H0YJX3 145 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 KDM4BO94953 1096 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 CYB5AP00167 134 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 NPBWR2P48146 333 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 RPL31P62899 125 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 COL10A1Q03692 680 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 ST3GAL4Q11206 333 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 BLMHQ13867 455 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 ZNF146Q15072 292 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 NCR3LG1Q68D85 454 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 RNF144BQ7Z419 303 aa12.42□□□□□ -0.42
SNRPA1-210ENST00000560383 SAXO1Q8IYX7 474 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms