RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CLEC5AQ9NY25 188 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 TREM2Q9NZC2 230 aa11.96□□□□□ -0.5
TRAF3-208ENST00000560371 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 HYAL3O43820 417 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 CDK5Q00535 292 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 LYG2Q86SG7 212 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 FAAP24Q9BTP7 215 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 SMIM18P0DKX4 95 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 MMP15P51511 669 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 PIGMQ9H3S5 423 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 B4E171 279 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 MOSPD3O75425 235 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 TSPAN7P41732 249 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 CDC34P49427 236 aaPredicted RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 PSG11Q9UQ72 335 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 C16orf97H3BN30 126 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 FCGR3BO75015 233 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 IGHV4-34P06331 123 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 SCGB1C2P0DMR2 95 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 KCNJ3P48549 501 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 HIST2H3AQ71DI3 136 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 SF3B5Q9BWJ5 86 aaKnown RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 FBXO8Q9NRD0 319 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 ASPDHA6ND91 283 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 PLPP2O43688 288 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 C12orf73Q69YU5 71 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 OR5H6Q8NGV6 325 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 NRTNQ99748 197 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 AUNIPQ9H7T9 357 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 A0A0A6YYJ9 748 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 MASP2O00187 686 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 AQP8O94778 261 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 ID4P47928 161 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 PCBP3P57721 371 aaKnown RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 RPUSD3Q6P087 351 aaKnown RBP11.95□□□□□ -0.5
TRAF3-208ENST00000560371 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 MPC1Q9Y5U8 109 aa11.95□□□□□ -0.5
TRAF3-208ENST00000560371 SNRPGP15A8MWD9 76 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 OR3A4PP47883 348 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 C20orf24Q9BUV8 137 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF727A8MUV8 499 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 GFRA3O60609 400 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 MPZL1O95297 269 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 SLC25A4P12235 298 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 PSG6Q00889 435 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TIPARPQ7Z3E1 657 aaKnown RBP11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TMEM229BQ8NBD8 167 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TMEM171Q8WVE6 324 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 PPP1R1CQ8WVI7 109 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ASB5Q8WWX0 329 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 MS4A5Q9H3V2 200 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 NTMQ9P121 344 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ONECUT2O95948 504 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 GABRB1P18505 474 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ENDOGQ14249 297 aaKnown RBP11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TMEM123Q8N131 208 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 OR8B3Q8NGG8 313 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 DYNC2LI1Q8TCX1 351 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 OR8B2Q96RD0 313 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 CD226Q15762 336 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ASB10Q8WXI3 467 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 FLVCR2Q9UPI3 526 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 TGFBR1P36897 503 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 LSM6P62312 80 aaKnown RBP11.94□□□□□ -0.5
TRAF3-208ENST00000560371 GUCA2AQ02747 115 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 ETFRF1Q6IPR1 90 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 OR2W3Q7Z3T1 314 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 PTP4A1Q93096 173 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 CHRDL1Q9BU40 450 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 LRRC37AA6NMS7 1700 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 NRXN2Q9P2S2 1712 aa11.94□□□□□ -0.5
TRAF3-208ENST00000560371 A0A1W2PN81 502 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 FAM157AC9JC47 383 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 CHRNA7P36544 502 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 IGHV3-7P01780 117 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 SP6Q3SY56 376 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 THSD4Q6ZMP0 1018 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 UBE2L5PA0A1B0GUS4 154 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 H7BYZ3 331 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 SMIM4Q8WVI0 70 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 RHNO1Q9BSD3 238 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 LRFN3Q9BTN0 628 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 OR5V1Q9UGF6 321 aa11.93□□□□□ -0.5
TRAF3-208ENST00000560371 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
TRAF3-208ENST00000560371 HRKO00198 91 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms