RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 AQP10Q96PS8 301 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 A4GNTQ9UNA3 340 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 VSIG4Q9Y279 399 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 HDGFL3Q9Y3E1 203 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 CXorf1O96002 111 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 B3GALT4O96024 378 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 CD74P04233 296 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 FAHP16930 419 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC37A1P57057 533 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 LINC00303Q3SY05 128 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 WDFY1Q8IWB7 410 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 Q8WTZ3 238 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 LINC00052Q96N35 136 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 SNURFLB1AK76 121 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 MPDU1O75352 247 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 SMIM4Q8WVI0 70 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 ACER3Q9NUN7 267 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNFX1Q9P2E3 1918 aaKnown RBP12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 ARRDC5A6NEK1 342 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 GNG7O60262 68 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 SFT2D2O95562 160 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 HPXP02790 462 aa12.42□□□□□ -0.42
CSPG4P12-202ENST00000559989 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 TCL1AP56279 114 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 NKAIN4Q8IVV8 208 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 OIT3Q8WWZ8 545 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 VN1R1Q9GZP7 353 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC25A19Q9HC21 320 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZAR1LA6NP61 321 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 PSG5Q15238 335 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 TMEM70Q9BUB7 260 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 PRR14Q9BWN1 585 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 NUP205Q92621 2012 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 GPX5O75715 221 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 NGFP01138 241 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 NPBWR2P48146 333 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZXDAP98168 799 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 COL19A1Q14993 1142 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 LEMD1Q68G75 181 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 JMJD6Q6NYC1 403 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 CACNG5Q9UF02 275 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 TRGV8A0A0C4DH27 118 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 SNAI1O95863 264 aaPredicted RBP12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF740Q8NDX6 193 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ST6GAL1P15907 406 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 RHBDD2Q6NTF9 364 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR4S2Q8NH73 311 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 VSTM2AQ8TAG5 236 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 LRRC3BQ96PB8 259 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 PAAF1Q9BRP4 392 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 A0A0U1RQS6 177 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF750Q32MQ0 723 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR2C3Q8N628 320 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 SDF2Q99470 211 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ABHD14AQ9BUJ0 271 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZMIZ1Q9ULJ6 1067 aa12.41□□□□□ -0.42
CSPG4P12-202ENST00000559989 IER3P46695 156 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SOX4Q06945 474 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 HSF5Q4G112 596 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC25A30Q5SVS4 291 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 ZNF441Q8N8Z8 693 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 KCNMB2Q9Y691 235 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 ERVFRD-1P60508 538 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SPINK9Q5DT21 86 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 C10orf113Q5VZT2 155 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 ABHD17CQ6PCB6 329 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 MRGPREQ86SM8 312 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 LRRTM3Q86VH5 581 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLCO1C1Q9NYB5 712 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 HS3ST3A1Q9Y663 406 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SCN8AQ9UQD0 1980 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 TP53INP2Q8IXH6 220 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 OR4C13Q8NGP0 309 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SS18L1O75177 396 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 GP1BAP07359 652 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 PNLIPRP2P54317 469 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SLC35E3Q7Z769 313 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 UBE2FQ969M7 185 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 PPP6CO00743 305 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 KLF3P57682 345 aaPredicted RBP12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 NTHL1P78549 312 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 TNXAQ16473 311 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 SP6Q3SY56 376 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.42
CSPG4P12-202ENST00000559989 ARF6P62330 175 aa12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 GCSAMLQ5JQS6 135 aa12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 SLC16A11Q8NCK7 471 aa12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 RAB1BQ9H0U4 201 aa12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 KLK11Q9UBX7 282 aa12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.43
CSPG4P12-202ENST00000559989 ICOSLGO75144 302 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms