RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SLX4IPQ5VYV7 408 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 TMEM236Q5W0B7 351 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 ZNF322Q6U7Q0 402 aaPredicted RBP7.38□□□□□ -1.23
HDDC3-204ENST00000559834 C16orf82Q7Z2V1 217 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 TMEM179BQ7Z7N9 219 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 ANGPTL5Q86XS5 388 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 AQP12AQ8IXF9 295 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 ADGRG5Q8IZF4 528 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 OR8H2Q8N162 312 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 OR14K1Q8NGZ2 314 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 NDNFQ8TB73 568 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 CANT1Q8WVQ1 401 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 DNAJC9Q8WXX5 260 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 STMN2Q93045 179 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 CEP19Q96LK0 163 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 CNN2Q99439 309 aaKnown RBP7.38□□□□□ -1.23
HDDC3-204ENST00000559834 PRRG3Q9BZD7 231 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 GLS2Q9UI32 602 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 OR52A1Q9UKL2 312 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 HILPDAQ9Y5L2 63 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 SNX5Q9Y5X3 404 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 R4GMQ9 66 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 V9GYS6 101 aa7.38□□□□□ -1.23
HDDC3-204ENST00000559834 FAM230AA0A1W2PPH8 454 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 A0A1W2PRX2 142 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 TCRBV4S1A1TA0A5B7 111 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ADARB2-AS1A8MUL3 147 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 FAM90A22PA8MWA6 464 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ZNF670-ZNF695F2Z2N8 137 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ZNF737O75373 536 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 MPIG6BO95866 241 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 FAM107AO95990 144 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 PF4P02776 101 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 IGLL1P15814 213 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 CALB2P22676 271 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 HTR1DP28221 377 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 PEX2P28328 305 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 FUT6P51993 359 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ARHGDIBP52566 201 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 CRISP1P54107 249 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 CXCR4P61073 352 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 GNGT1P63211 74 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 SLC35A2P78381 396 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 MFGE8Q08431 387 aaPredicted RBP7.37□□□□□ -1.23
HDDC3-204ENST00000559834 DEFB121Q5J5C9 76 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 MEPCEQ7L2J0 689 aaKnown RBP7.37□□□□□ -1.23
HDDC3-204ENST00000559834 EGFL6Q8IUX8 553 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 Q8IYB0 196 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ENTHD1Q8IYW4 607 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 BATF2Q8N1L9 274 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ZNF676Q8N7Q3 588 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 CCDC54Q8NEL0 328 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 CCDC124Q96CT7 223 aaKnown RBP7.37□□□□□ -1.23
HDDC3-204ENST00000559834 APOL4Q9BPW4 351 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 OCSTAMPQ9BR26 566 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 ADI1Q9BV57 179 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 PLEKHA1Q9HB21 404 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 SEBOXQ9HB31 216 aaPredicted RBP7.37□□□□□ -1.23
HDDC3-204ENST00000559834 COPS3Q9UNS2 423 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 TSSC4Q9Y5U2 329 aaPredicted RBP7.37□□□□□ -1.23
HDDC3-204ENST00000559834 LINC00312Q9Y6C7 94 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
HDDC3-204ENST00000559834 IGHV2-26A0A0B4J1V2 119 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 A0A1B0GTI1 187 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 CCDC182A6NF36 153 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 A6NIN4 97 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 PRR32B1ATL7 298 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 SRSF10O75494 262 aaKnown RBP7.36□□□□□ -1.23
HDDC3-204ENST00000559834 GATBO75879 557 aaKnown RBP7.36□□□□□ -1.23
HDDC3-204ENST00000559834 CYB5AP00167 134 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 EDDM3AQ14507 147 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 LDLRAD2Q5SZI1 272 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 OR52W1Q6IF63 320 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 Q6ZS46 218 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 Q6ZSR3 168 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 RTN4RL2Q86UN3 420 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 SLC35F2Q8IXU6 374 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 HS3ST5Q8IZT8 346 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 OR4X2Q8NGF9 303 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 TRMT10AQ8TBZ6 339 aaKnown RBP7.36□□□□□ -1.23
HDDC3-204ENST00000559834 ZNF596Q8TC21 504 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 CREB3L1Q96BA8 519 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 NRBF2Q96F24 287 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 RCC1LQ96I51 464 aaKnown RBP7.36□□□□□ -1.23
HDDC3-204ENST00000559834 THTPAQ9BU02 230 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 CLEC7AQ9BXN2 247 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 TTTY10Q9BZA0 68 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 TMEM133Q9H2Q1 129 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 PAPOLBQ9NRJ5 636 aaKnown RBP7.36□□□□□ -1.23
HDDC3-204ENST00000559834 CLN6Q9NWW5 311 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 MTCH1Q9NZJ7 389 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 DPM3Q9P2X0 92 aa7.36□□□□□ -1.23
HDDC3-204ENST00000559834 PRKDCP78527 4128 aaKnown RBP7.35□□□□□ -1.23
HDDC3-204ENST00000559834 TMEM82A0PJX8 343 aa7.35□□□□□ -1.23
HDDC3-204ENST00000559834 MEX3AA1L020 520 aaKnown RBP7.35□□□□□ -1.23
HDDC3-204ENST00000559834 FUOMA2VDF0 154 aa7.35□□□□□ -1.23
HDDC3-204ENST00000559834 MGST3O14880 152 aa7.35□□□□□ -1.23
HDDC3-204ENST00000559834 SYT7O43581 403 aa7.35□□□□□ -1.23
HDDC3-204ENST00000559834 PRKYO43930 277 aa7.35□□□□□ -1.23
HDDC3-204ENST00000559834 RPP14O95059 124 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms