RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ID4P47928 161 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 NOVA1P51513 510 aaKnown RBP8.7□□□□□ -1.02
LRRC28-216ENST00000559819 STK11Q15831 433 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 DCAF12Q5T6F0 453 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 UQCC3Q6UW78 93 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 OSR2Q8N2R0 312 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 CCDC54Q8NEL0 328 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 OR11L1Q8NGX0 322 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 ARL11Q969Q4 196 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 HES7Q9BYE0 225 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 TREM1Q9NP99 234 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 COLQQ9Y215 455 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-216ENST00000559819 ST3GAL6Q9Y274 331 aa8.7□□□□□ -1.02
LRRC28-216ENST00000559819 OR5AC1P0C628 307 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 ZNF728P0DKX0 622 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 CCL2P13500 99 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 SPINK2P20155 84 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 PABPC1L2AQ5JQF8 200 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 NSUN5P2Q63ZY6 315 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 TMEM42Q69YG0 159 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 RTL6Q6ICC9 239 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 LDLRAD3Q86YD5 345 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 CALHM1Q8IU99 346 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 CPEB3Q8NE35 698 aaKnown RBP8.69□□□□□ -1.02
LRRC28-216ENST00000559819 ADAMTS17Q8TE56 1095 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 NECAP2Q9NVZ3 263 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 P4HTMQ9NXG6 502 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 FBXL17Q9UF56 701 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 A0A096LPE4 126 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 A0A1W2PPZ6 126 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 F8W036 122 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 FBXO24O75426 580 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 PET100P0DJ07 73 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 CCNOP22674 350 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 RPL12P30050 165 aaKnown RBP8.69□□□□□ -1.02
LRRC28-216ENST00000559819 FCGR2CP31995 323 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 LPAR6P43657 344 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 NPBWR2P48146 333 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 FOXG1P55316 489 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-216ENST00000559819 BLOC1S1P78537 153 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 PDZK1IP1Q13113 114 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 PDSS1Q5T2R2 415 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 C6orf15Q6UXA7 325 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-216ENST00000559819 ASCL4Q6XD76 172 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 OR5L1Q8NGL2 311 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 PSMF1Q92530 271 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 CPNE2Q96FN4 548 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-216ENST00000559819 GUCD1Q96NT3 240 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 IER2Q9BTL4 223 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 TAF9BQ9HBM6 251 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 DNAJB11Q9UBS4 358 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 LPAR3Q9UBY5 353 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 HSF4Q9ULV5 492 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
LRRC28-216ENST00000559819 B4E171 279 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 AGPAT2O15120 278 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 MED6O75586 246 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 IGHEP01854 428 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 MMP7P09237 267 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-216ENST00000559819 TSPAN7P41732 249 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 CYB561P49447 251 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 GFRA1P56159 465 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 LYZL2Q7Z4W2 148 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 ERGIC1Q969X5 290 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 THOC3Q96J01 351 aaKnown RBP8.68□□□□□ -1.02
LRRC28-216ENST00000559819 PARP12Q9H0J9 701 aaKnown RBP8.68□□□□□ -1.02
LRRC28-216ENST00000559819 TLNRD1Q9H1K6 362 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 NAA60Q9H7X0 242 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 MMP26Q9NRE1 261 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 ZNF629Q9UEG4 869 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-216ENST00000559819 EDARQ9UNE0 448 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 K7EPK0 472 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 XRCC2O43543 280 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 CYTIPO60759 359 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 DEDDO75618 318 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 DIRAS3O95661 229 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 CTRB1P17538 263 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 DTYMKP23919 212 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 FOXO1Q12778 655 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 TMEM187Q14656 261 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 DAZAP2Q15038 168 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-216ENST00000559819 ABCA11PQ4W5N1 156 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 CTRB2Q6GPI1 263 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 FAM122CQ6P4D5 195 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 CBLN2Q8IUK8 224 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 FAM71E2Q8N5Q1 922 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 RTN4IP1Q8WWV3 396 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-216ENST00000559819 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 PRRX2Q99811 253 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 BCO1Q9HAY6 547 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 DECR2Q9NUI1 292 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 SLC7A11Q9UPY5 501 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 PRELID1Q9Y255 219 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 AMDHD2Q9Y303 409 aa8.68□□□□□ -1.02
LRRC28-216ENST00000559819 C19orf67A6NJJ6 358 aa8.67□□□□□ -1.02
LRRC28-216ENST00000559819 IFNA21P01568 189 aa8.67□□□□□ -1.02
LRRC28-216ENST00000559819 SERPINA7P05543 415 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms