RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 RHOFQ9HBH0 211 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ZNF581Q9P0T4 197 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 ZNF221Q9UK13 617 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 POU2F3Q9UKI9 436 aa10.83□□□□□ -0.68
USP3-213ENST00000559711 A0A1B0GWJ7 208 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 F8VVB4 439 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 F8VWA3 439 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 J3QT63 122 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 SYNGR1O43759 233 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 PDCD6O75340 191 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 FUT3P21217 361 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 EIF2B2P49770 351 aaKnown RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 MICBQ29980 383 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 NKAPLQ5M9Q1 402 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 CD276Q5ZPR3 534 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 TMEM211Q6ICI0 200 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 SEZ6L2Q6UXD5 910 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 NCCRP1Q6ZVX7 275 aaPredicted RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 SLC36A1Q7Z2H8 476 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 RELL2Q8NC24 303 aaPredicted RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 FAAP24Q9BTP7 215 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 MED28Q9H204 178 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 PLK3Q9H4B4 646 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 TMEM100Q9NV29 134 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 SH3BGRL2Q9UJC5 107 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 LRP5LA4QPB2 252 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 C16orf97H3BN30 126 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 M0R1B8 84 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 HPXP02790 462 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 ANXA7P20073 488 aaKnown RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 CCKARP32238 428 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 WDR86Q86TI4 376 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 TCTE3Q8IZS6 198 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 BEST4Q8NFU0 473 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 OR13C8Q8NGS7 320 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 RND1Q92730 232 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 SULT4A1Q9BR01 284 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 ADAT1Q9BUB4 502 aaKnown RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 ST6GALNAC5Q9BVH7 336 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 BEX2Q9BXY8 128 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 BEX1Q9HBH7 125 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 RANGRFQ9HD47 186 aaPredicted RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 MYOZ1Q9NP98 299 aaPredicted RBP10.82□□□□□ -0.68
USP3-213ENST00000559711 AK3Q9UIJ7 227 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 EDARQ9UNE0 448 aa10.82□□□□□ -0.68
USP3-213ENST00000559711 SPTA1P02549 2419 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 TMEM210A6NLX4 147 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 A8MV72 311 aaPredicted RBP10.81□□□□□ -0.68
USP3-213ENST00000559711 SNRPGP15A8MWD9 76 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 CRYAAP02489 173 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 PMP2P02689 132 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 SFTPCP11686 197 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 DTYMKP23919 212 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 GCH1P30793 250 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 FABP6P51161 128 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 SNU13P55769 128 aaKnown RBP10.81□□□□□ -0.68
USP3-213ENST00000559711 CBX3Q13185 183 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 FCN2Q15485 313 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 OR8G1Q15617 311 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 NKPD1Q17RQ9 610 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 MPV17LQ2QL34 196 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 C22orf34Q6ZV56 151 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 SSX8Q7RTT4 187 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 ARRDC1Q8N5I2 433 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 ST6GALNAC3Q8NDV1 305 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 RADILQ96JH8 1075 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 CHST6Q9GZX3 395 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 ING3Q9NXR8 418 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 RCC2Q9P258 522 aaKnown RBP10.81□□□□□ -0.68
USP3-213ENST00000559711 MEMO1Q9Y316 297 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 SPEF1Q9Y4P9 236 aa10.81□□□□□ -0.68
USP3-213ENST00000559711 H3BUI4 141 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 OR7C1O76099 320 aaPredicted RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 RLN1P04808 185 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 IFNA6P05013 189 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 CSN2P05814 226 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 ACAA1P09110 424 aaPredicted RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 VSIG10L2P0DP72 767 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 ZNF250P15622 560 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 AMY2BP19961 511 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 GLRXP35754 106 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 TAS2R46P59540 309 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 NKX6-1P78426 367 aaPredicted RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 CD83Q01151 205 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 IL13RA2Q14627 380 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 RGS7BPQ6MZT1 257 aaPredicted RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 LINC00596Q86U02 117 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 SPERTQ8NA61 448 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 SCCPDHQ8NBX0 429 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 MRGPRFQ96AM1 343 aa10.8□□□□□ -0.68
USP3-213ENST00000559711 FYTTD1Q96QD9 318 aaKnown RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 CMSS1Q9BQ75 279 aaKnown RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 GPN1Q9HCN4 374 aaPredicted RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 ZNF230Q9UIE0 474 aaPredicted RBP10.8□□□□□ -0.68
USP3-213ENST00000559711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.79□□□□□ -0.68
USP3-213ENST00000559711 TMEM82A0PJX8 343 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 H0YL77 283 aa10.79□□□□□ -0.68
USP3-213ENST00000559711 MLNRO43193 412 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms