RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FOXJ3Q9UPW0 622 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
CARMIL3-202ENST00000559694 WDR87Q6ZQQ6 2873 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 NPIPB9F8W1W9 429 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 TINAGL1Q9GZM7 467 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 C1orf123Q9NWV4 160 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PCNTO95613 3336 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 SIGLEC5O15389 551 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF354AO60765 605 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 OR2C1O95371 312 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 SEMG1P04279 462 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PI3P19957 117 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 DUSP1P28562 367 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PPP1CBP62140 327 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 FABP9Q0Z7S8 132 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PLGLAQ15195 96 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 WNT2BQ93097 391 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 NICN1Q9BSH3 213 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 TMEM38BQ9NVV0 291 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 MTFP1Q9UDX5 166 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 OR5V1Q9UGF6 321 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PKDREJQ9NTG1 2253 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 PTPRQQ9UMZ3 2332 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A0B4J293 547 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 UMAD1C9J7I0 102 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 SERPINE2P07093 398 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 NFYBP25208 207 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 HOXA1P49639 335 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 GPM6AP51674 278 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 MRPS34P82930 218 aaKnown RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 ACTBL2Q562R1 376 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 SLC25A30Q5SVS4 291 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 RTL6Q6ICC9 239 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 UNQ6494/PRO21346Q6UXR6 183 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 HIST2H3AQ71DI3 136 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF709Q8N972 641 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 OR13G1Q8NGZ3 307 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 ZPLD1Q8TCW7 415 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 CMBLQ96DG6 245 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 CMTM3Q96MX0 182 aa9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 NKX3-1Q99801 234 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF703Q9H7S9 590 aaPredicted RBP9.36□□□□□ -0.91
CARMIL3-202ENST00000559694 TMEM218A2RU14 115 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 CXCL2P19875 107 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 FBXW12Q6X9E4 464 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF695Q8IW36 515 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 SCCPDHQ8NBX0 429 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 PP6455Q8WZ26 134 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 FRZBQ92765 325 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 AKR1E2Q96JD6 320 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 CA10Q9NS85 328 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 FAM96BQ9Y3D0 163 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 C2orf16Q68DN1 1984 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 ANKRD20A5PA0PJZ0 165 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 MPC2O95563 127 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 BPNT1O95861 308 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 CHRM2P08172 466 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 TNFRSF1AP19438 455 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 TAS2R46P59540 309 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 LAMTOR1Q6IAA8 161 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 SPIN2AQ99865 258 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 SPIN2BQ9BPZ2 258 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 NIPSNAP3BQ9BS92 247 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 PRSS50Q9UI38 385 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 MSRB2Q9Y3D2 182 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 PCDHGA9Q9Y5G4 932 aaKnown RBP9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 HELZP42694 1942 aaKnown RBP9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF407Q9C0G0 2248 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 RNASEK-C17orf49H0YIS7 233 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 SIRPB1O00241 398 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 HEXAP06865 529 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 KLF3P57682 345 aaPredicted RBP9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 ZP4Q12836 540 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 CLINT1Q14677 625 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 LYG2Q86SG7 212 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 MRPL41Q8IXM3 137 aaKnown RBP9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 ZNF441Q8N8Z8 693 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 CCDC71LQ8N9Z2 235 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 OR6K3Q8NGY3 331 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 IGKV1D-42A0A075B6H8 117 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 hCG_1809904A0A1W2PP81 198 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A1W2PPE2 198 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A1W2PR64 198 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 A0A1W2PRV1 198 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 IGHA1P01876 353 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 RPA2P15927 270 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 KCNJ3P48549 501 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 DHRS2Q13268 280 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 KLF9Q13886 244 aaPredicted RBP9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 LHFPL2Q6ZUX7 228 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 OR51A2Q8NGJ7 313 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 CCL17Q92583 94 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 OCSTAMPQ9BR26 566 aa9.35□□□□□ -0.91
CARMIL3-202ENST00000559694 ADAT1Q9BUB4 502 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms