RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 METTL9Q9H1A3 318 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 HRASLSQ9HDD0 168 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 TAS2R8Q9NYW2 309 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 MRPL15Q9P015 296 aaKnown RBP14.04□□□□□ -0.16
TPM1-219ENST00000559397 NLKQ9UBE8 527 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 IGKV1-12A0A0C4DH73 117 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 A0A1B0GWJ7 208 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 SOCS1O15524 211 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 IGKV1D-12P01611 117 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 TMEM50BP56557 158 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 CDNFQ49AH0 187 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 AGAP6Q5VW22 663 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 PLET1Q6UQ28 207 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 Q6ZR03 302 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 Q6ZTK2 550 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 Q8NFD4 153 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 OR10K1Q8NGX5 313 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 OR5P3Q8WZ94 311 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 GTF3AQ92664 365 aaKnown RBP14.04□□□□□ -0.16
TPM1-219ENST00000559397 MARVELD1Q9BSK0 173 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 TRAF4Q9BUZ4 470 aaPredicted RBP14.04□□□□□ -0.16
TPM1-219ENST00000559397 SELENOIQ9C0D9 397 aa14.04□□□□□ -0.16
TPM1-219ENST00000559397 ARFGEF3Q5TH69 2177 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 TMEM235A6NFC5 223 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 NAP1L6A6NFF2 107 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 SPRY1O43609 319 aaPredicted RBP14.03□□□□□ -0.16
TPM1-219ENST00000559397 ANGPTL7O43827 346 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 PFDN1O60925 122 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 ZNF780AO75290 641 aaPredicted RBP14.03□□□□□ -0.16
TPM1-219ENST00000559397 GSTP1P09211 210 aaKnown RBP14.03□□□□□ -0.16
TPM1-219ENST00000559397 SERPINA2P20848 420 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 KRTAP10-9P60411 292 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 PLAC9Q5JTB6 97 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 C20orf204Q6ZNR8 217 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 GLCCI1Q86VQ1 547 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 CALHM1Q8IU99 346 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 SAXO1Q8IYX7 474 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 CHST4Q8NCG5 386 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 IGFBPL1Q8WX77 278 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 RNF170Q96K19 258 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 Q96M66 194 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 ZMAT3Q9HA38 289 aaKnown RBP14.03□□□□□ -0.16
TPM1-219ENST00000559397 MSL2Q9HCI7 577 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM1-219ENST00000559397 ZNF107Q9UII5 783 aaPredicted RBP14.03□□□□□ -0.16
TPM1-219ENST00000559397 ELF5Q9UKW6 265 aaPredicted RBP14.03□□□□□ -0.16
TPM1-219ENST00000559397 TACC2O95359 2948 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 DSCAMO60469 2012 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 CENPEQ02224 2701 aa14.03□□□□□ -0.16
TPM1-219ENST00000559397 OR5B21A6NL26 309 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 HIST1H1DP16402 221 aaKnown RBP14.02□□□□□ -0.16
TPM1-219ENST00000559397 RSU1Q15404 277 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 NKPD1Q17RQ9 610 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 OR51T1Q8NGJ9 327 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 RAB3CQ96E17 227 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 MRPS24Q96EL2 167 aaKnown RBP14.02□□□□□ -0.16
TPM1-219ENST00000559397 HIST1H2AAQ96QV6 131 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 ELL3Q9HB65 397 aaPredicted RBP14.02□□□□□ -0.16
TPM1-219ENST00000559397 TMEM100Q9NV29 134 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 LAMP3Q9UQV4 416 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 KCNK7Q9Y2U2 307 aa14.02□□□□□ -0.16
TPM1-219ENST00000559397 ZSCAN5BA6NJL1 495 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 ZNF732B4DXR9 585 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 MFNGO00587 321 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 MLNRO43193 412 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 MT-ND4P03905 459 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 CSF1P09603 554 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 GTF2F2P13984 249 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 GNB3P16520 340 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 CA6P23280 308 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 CPT2P23786 658 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 ACTBP60709 375 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 SNRPD2P62316 118 aaKnown RBP14.01□□□□□ -0.17
TPM1-219ENST00000559397 ACTG1P63261 375 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 PCGF3Q3KNV8 242 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 CHAC2Q8WUX2 184 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 CREB3L1Q96BA8 519 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 UPRTQ96BW1 309 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 POM121Q96HA1 1249 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 DPAGT1Q9H3H5 408 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 COPZ2Q9P299 210 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 PLSCR5A0PG75 271 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 M0R233 179 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 AKR7A2O43488 359 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 HTR3BO95264 441 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 GPM6AP51674 278 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 PNLIPRP3Q17RR3 467 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 RTN4RL2Q86UN3 420 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 TMEM229BQ8NBD8 167 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 OR13G1Q8NGZ3 307 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 OR51F2Q8NH61 342 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 PPP1R14BQ96C90 147 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 NEURL2Q9BR09 285 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 CACNG6Q9BXT2 260 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 LIME1Q9H400 295 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 PCDHB16Q9NRJ7 776 aa14.01□□□□□ -0.17
TPM1-219ENST00000559397 NOP16Q9Y3C1 178 aaKnown RBP14.01□□□□□ -0.17
TPM1-219ENST00000559397 MEIS3P1A6NDR6 274 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms