RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 APOFQ13790 326 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 GK3PQ14409 553 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 FAM98BQ52LJ0 330 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 KHDC1LQ5JSQ8 128 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 OR8H2Q8N162 312 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 OR4X2Q8NGF9 303 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 AKR1E2Q96JD6 320 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 PKIBQ9C010 78 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 LIN7BQ9HAP6 207 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 SESN1Q9Y6P5 492 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 V9GYS6 101 aa12.98□□□□□ -0.33
CDC42BPB-205ENST00000559245 hADV38S2A0JD32 116 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 ARRDC5A6NEK1 342 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 A6NIN4 97 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 DNAJC8O75937 253 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 LPLP06858 475 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 CD24P25063 80 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 HTR1DP28221 377 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 CDK5Q00535 292 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 IL24Q13007 206 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 IL18R1Q13478 541 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 EDDM3AQ14507 147 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 ABCA11PQ4W5N1 156 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 C10orf99Q6UWK7 81 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 LINC00482Q8N8I6 264 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 CCDC197Q8NCU1 140 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 CAPSLQ8WWF8 208 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 DPF1Q92782 380 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 SNX22Q96L94 193 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 CLEC7AQ9BXN2 247 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 TMEM133Q9H2Q1 129 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 DNAJB9Q9UBS3 223 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 IKZF2Q9UKS7 526 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 GTF2A1LQ9UNN4 478 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 COPS3Q9UNS2 423 aa12.97□□□□□ -0.33
CDC42BPB-205ENST00000559245 A0A1B0GTI1 187 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 TMEM82A0PJX8 343 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 LOC110117498-PIK3R3F6TDL0 507 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 F8VVB4 439 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 F8VWA3 439 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 SRSF10O75494 262 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 OSMP13725 252 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 ZBTB49Q6ZSB9 765 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 TMEM179BQ7Z7N9 219 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 DHFR2Q86XF0 187 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 TPRX1Q8N7U7 411 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 OR4P4Q8NGL7 312 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 OR14K1Q8NGZ2 314 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 TRMT10AQ8TBZ6 339 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 ASB17Q8WXJ9 295 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 LINC00312Q9Y6C7 94 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 TMEM14AQ9Y6G1 99 aa12.96□□□□□ -0.33
CDC42BPB-205ENST00000559245 FAM230AA0A1W2PPH8 454 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 CCDC182A6NF36 153 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 CST1P01037 141 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 BRS3P32247 399 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 BCL2L15Q5TBC7 163 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 ELMOD2Q8IZ81 293 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 STMN2Q93045 179 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 CEP19Q96LK0 163 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 CADM1Q9BY67 442 aaKnown RBP12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 MOB1AQ9H8S9 216 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 MTCH1Q9NZJ7 389 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 DPM3Q9P2X0 92 aa12.95□□□□□ -0.34
CDC42BPB-205ENST00000559245 SH2D7A6NKC9 451 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 DHRS7CA6NNS2 312 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 E2F6O75461 281 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 MMP23AO75900 390 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 DCTN3O75935 186 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 OR2F2O95006 317 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 INMTO95050 263 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 IGHA1P01876 353 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 RAP2AP10114 183 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 PEX2P28328 305 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 MS4A2Q01362 244 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 TRIM25Q14258 630 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 GRK1Q15835 563 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 MRPL41Q8IXM3 137 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 OR52N4Q8NGI2 321 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 SLAMF9Q96A28 289 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 RBM14Q96PK6 669 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 CHST6Q9GZX3 395 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 ZNF556Q9HAH1 456 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 OR52A1Q9UKL2 312 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 SLC7A11Q9UPY5 501 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 R4GMQ9 66 aa12.94□□□□□ -0.34
CDC42BPB-205ENST00000559245 MAGEB4O15481 346 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 AMY1AP04745 511 aa12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 AMY2AP04746 511 aa12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 GABRR1P24046 479 aa12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 DCTN2Q13561 401 aaKnown RBP12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 SLX4IPQ5VYV7 408 aa12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 ZNF322Q6U7Q0 402 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPB-205ENST00000559245 ETV3LQ6ZN32 361 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms