RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 KCNK7Q9Y2U2 307 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 USP9YO00507 2555 aaPredicted RBP13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 ICE1Q9Y2F5 2266 aa13.61□□□□□ -0.23
CDC42BPB-204ENST00000559043 HEATR1Q9H583 2144 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 DPRXA6NFQ7 191 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 F5H5P2 479 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 GOSR2O14653 212 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 IFNA7P01567 189 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 PPP3CBP16298 524 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 NFYAP23511 347 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 UBE2MP61081 183 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 FAM169BQ8N8A8 192 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 PP6455Q8WZ26 134 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 MRGPRFQ96AM1 343 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 GHRLQ9UBU3 117 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 A1L4Q6 167 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 LINC00862A6NCI5 91 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 MCRIP1C9JLW8 97 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 M0R135 149 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 M0R233 179 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 SIX6O95475 246 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 MPIG6BO95866 241 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 ZNF35P13682 527 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 HTR5AP47898 357 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 SLC6A9P48067 706 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 EXOSC2Q13868 293 aaKnown RBP13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 OPCMLQ14982 345 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 SLC22A6Q4U2R8 563 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 PLAC9Q5JTB6 97 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 DCAF12L2Q5VW00 463 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 DMRTC2Q8IXT2 367 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 SPTSSAQ969W0 71 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 ZNF799Q96GE5 643 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 TMEM59Q9BXS4 323 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 NDRG3Q9UGV2 375 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 PLEKHA6Q9Y2H5 1048 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 AUP1Q9Y679 476 aa13.6□□□□□ -0.23
CDC42BPB-204ENST00000559043 M0R1B8 84 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 NOS1APO75052 506 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 NAT2P11245 290 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 HIST1H1DP16402 221 aaKnown RBP13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 NAT1P18440 290 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 CALCRP30988 508 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 TMEM50BP56557 158 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 KISS1Q15726 138 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 SCGB2B2Q4G0G5 96 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 OR52W1Q6IF63 320 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 TMED4Q7Z7H5 227 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 FAM89BQ8N5H3 189 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 C12orf45Q8N5I9 185 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 ZDHHC22Q8N966 263 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 RAB3CQ96E17 227 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 ELMOD3Q96FG2 381 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 GPER1Q99527 375 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 CHST5Q9GZS9 411 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 IFT46Q9NQC8 304 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 VSIG4Q9Y279 399 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 KLF2Q9Y5W3 355 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 DCHS2Q6V1P9 2916 aa13.59□□□□□ -0.23
CDC42BPB-204ENST00000559043 C5orf49A4QMS7 147 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 SOCS1O15524 211 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 MTRF1O75570 445 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 PTGFRP43088 359 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 SEC61A1P61619 476 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 PLP2Q04941 152 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 UBE2V2Q15819 145 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 NKPD1Q17RQ9 610 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 PNLIPRP3Q17RR3 467 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 CLVS2Q5SYC1 327 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 SLC25A42Q86VD7 318 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 PNLDC1Q8NA58 520 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 SLC30A7Q8NEW0 376 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR56B1Q8NGI3 324 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR52H1Q8NGJ2 320 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 BANF2Q9H503 90 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 PRSS44E7EML9 344 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 L7N2F9 121 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 MFNGO00587 321 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 CFDP00746 253 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 CSN2P05814 226 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 COX5BP10606 129 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 CCNOP22674 350 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 HRH1P35367 487 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 WNT5AP41221 380 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR3A3P47888 321 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 DHRS2Q13268 280 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 LY6G6FQ5SQ64 297 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 DRAM2Q6UX65 266 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR8H3Q8N146 312 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 URM1Q9BTM9 101 aaKnown RBP13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 OR10A2Q9H208 303 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 UBQLN2Q9UHD9 624 aa13.58□□□□□ -0.24
CDC42BPB-204ENST00000559043 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 ROS1P08922 2347 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 PKDREJQ9NTG1 2253 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 A0A1W2PP11 408 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 RPS10-NUDT3A0A1W2PQS6 291 aa13.57□□□□□ -0.24
CDC42BPB-204ENST00000559043 DHRS7CA6NNS2 312 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms