RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SPCS2Q15005 226 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 ZMYND11Q15326 602 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 DGUOKQ16854 277 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM201AQ5SY85 155 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 IDNKQ5T6J7 187 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 SHEQ5VZ18 495 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 TEX36Q5VZQ5 186 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 SFRP4Q6FHJ7 346 aaPredicted RBP5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 CRIP3Q6Q6R5 217 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 PRSS57Q6UWY2 283 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 ACP7Q6ZNF0 438 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 C1QL2Q7Z5L3 287 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 LYPD6Q86Y78 171 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM90A1Q86YD7 464 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM58AQ8N1B3 248 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 OSR2Q8N2R0 312 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 SPICQ8N5J4 248 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 C19orf18Q8NEA5 215 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 DEFB108BQ8NET1 73 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 KCNG3Q8TAE7 436 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 C10orf105Q8TEF2 133 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 SLC25A46Q96AG3 418 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM3DQ96BQ1 224 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 C12orf43Q96C57 262 aaKnown RBP5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 FOXC2Q99958 501 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 GAL3ST1Q99999 423 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 BPESC1Q9GZL8 116 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 RBM38Q9H0Z9 239 aaKnown RBP5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 WDR13Q9H1Z4 485 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 NARFLQ9H6Q4 476 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 BATF3Q9NR55 127 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 RBFOX1Q9NWB1 397 aaKnown RBP5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 IL36GQ9NZH8 169 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 OR14J1Q9UGF5 321 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 GLS2Q9UI32 602 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 ITGB1BP2Q9UKP3 347 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 PCDHB10Q9UN67 800 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 ITPR3Q14573 2671 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 OTOGQ6ZRI0 2925 aa5.54□□□□□ -1.52
CHRNA3-204ENST00000559002 MYO9AB2RTY4 2548 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 CSMD2Q7Z408 3487 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 FLNAP21333 2647 aaKnown RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 IGHV4-30-2A0A087WSY4 118 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 OR2AT4A6NND4 320 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 F8VVB4 439 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 F8VWA3 439 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 NDUFA2O43678 99 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 TMEM127O75204 238 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 MPIG6BO95866 241 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 KNG1P01042 644 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 IGHV2-70P01814 119 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 GYPAP02724 150 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 HEXAP06865 529 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 VSIG8P0DPA2 414 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 CALCBP10092 127 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 CD37P11049 281 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF44P15621 663 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 MGMTP16455 207 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 CFPP27918 469 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 NR4A2P43354 598 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 FGF12P61328 243 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 HOXA4Q00056 320 aaPredicted RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 ZNF404Q494X3 552 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 TMEM155Q4W5P6 130 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 SPIN3Q5JUX0 258 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 FOXB2Q5VYV0 432 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 ELP2Q6IA86 826 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM166AQ6J272 317 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 ASCL4Q6XD76 172 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 OR2W3Q7Z3T1 314 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 NR2C2APQ86WQ0 139 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 OR51D1Q8NGF3 324 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 LGALS14Q8TCE9 139 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 AP3S1Q92572 193 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 FAM46BQ96A09 425 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 SLC25A28Q96A46 364 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 SEH1LQ96EE3 360 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 MRPS24Q96EL2 167 aaKnown RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 Q96MF0 132 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 URM1Q9BTM9 101 aaKnown RBP5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 MRI1Q9BV20 369 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 TMEM59Q9BXS4 323 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 SELENOIQ9C0D9 397 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 KCNK15Q9H427 330 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 LIN7BQ9HAP6 207 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 TMEM165Q9HC07 324 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 HES4Q9HCC6 221 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 HMG20AQ9NP66 347 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 IL36RNQ9UBH0 155 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 ST3GAL6Q9Y274 331 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 VPS13CQ709C8 3753 aa5.53□□□□□ -1.52
CHRNA3-204ENST00000559002 A0A0B4J203 849 aa5.52□□□□□ -1.53
CHRNA3-204ENST00000559002 TMEM272A0A1B0GTI8 110 aa5.52□□□□□ -1.53
CHRNA3-204ENST00000559002 A0A1W2PP11 408 aa5.52□□□□□ -1.53
CHRNA3-204ENST00000559002 A6NHS1 94 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms