RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MIA3Q5JRA6 1907 aa2.72□□□□□ -1.97
TDP1-217ENST00000557782 EVC2Q86UK5 1308 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 TTC21AQ8NDW8 1320 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IGKV1-27A0A075B6S5 117 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IGKV3D-15A0A087WSY6 115 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IGHV6-1A0A0B4J1U7 121 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IGHV3-66A0A0C4DH42 116 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 FAM168BA1KXE4 195 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 METTL15A6NJ78 407 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 KRTAP29-1A8MX34 341 aaPredicted RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 NDUFC2-KCTD14E9PQ53 114 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 M0R1X1 148 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 LAD1O00515 517 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 CCDC22O60826 627 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 DHRS3O75911 302 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 VAMP5O95183 116 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 MT-ND4P03905 459 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IGHV4-34P06331 123 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 SPNP16150 400 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 PSMA1P25786 263 aaKnown RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 POLR2IP36954 125 aaKnown RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 CD79BP40259 229 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 OMPP47874 163 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IDH2P48735 452 aaKnown RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 GDI2P50395 445 aaKnown RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 GFERP55789 205 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 B2MP61769 119 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 CDK5Q00535 292 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 AESQ08117 197 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 TSPAN31Q12999 210 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 FAM53BQ14153 422 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 TMEM176BQ3YBM2 270 aaPredicted RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 FAM162BQ5T6X4 162 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 FAM173BQ6P4H8 233 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 CEMP1Q6PRD7 247 aaPredicted RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 SPNS3Q6ZMD2 512 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 FAM231DQ6ZW35 169 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 ZFP82Q8N141 532 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 CD177Q8N6Q3 437 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 DCAF4L2Q8NA75 395 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 C9orf106Q8NAJ2 232 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 ZNF485Q8NCK3 441 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 OR5M1Q8NGP8 315 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 ZNF420Q8TAQ5 688 aaPredicted RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 BLOC1S5Q8TDH9 187 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 FAM104AQ969W3 186 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 EXOSC8Q96B26 276 aaKnown RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 SELENOSQ9BQE4 189 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 SAMD10Q9BYL1 202 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 SLC25A31Q9H0C2 315 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 CDC42EP4Q9H3Q1 356 aaKnown RBP2.71□□□□□ -1.98
TDP1-217ENST00000557782 MAP1LC3AQ9H492 121 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 PRELID1Q9Y255 219 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 INSIG2Q9Y5U4 225 aa2.71□□□□□ -1.98
TDP1-217ENST00000557782 IGLV1-50A0A075B6I6 118 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 A0A1B0GXF2 115 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 PGPA6NDG6 321 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 KRBOX1C9JBD0 128 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 KCNK1O00180 336 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 CD5LO43866 347 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 SPAG7O75391 227 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 SERPINB7O75635 380 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 CD74P04233 296 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 RPS12P25398 132 aaKnown RBP2.7□□□□□ -1.98
TDP1-217ENST00000557782 CBX5P45973 191 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 ARF6P62330 175 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 GRB2P62993 217 aaKnown RBP2.7□□□□□ -1.98
TDP1-217ENST00000557782 CCL7P80098 99 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 CASP8Q14790 479 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 SPA17Q15506 151 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 LRRC26Q2I0M4 334 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 FBXL19-AS1Q494R0 122 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 Q499Y3 187 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 C9orf129Q5T035 196 aaKnown RBP2.7□□□□□ -1.98
TDP1-217ENST00000557782 SYPL2Q5VXT5 272 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 TNFAIP8L2Q6P589 184 aaPredicted RBP2.7□□□□□ -1.98
TDP1-217ENST00000557782 XKRXQ6PP77 449 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 TGIF2LYQ8IUE0 185 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 STK40Q8N2I9 435 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 RIBC1Q8N443 379 aaPredicted RBP2.7□□□□□ -1.98
TDP1-217ENST00000557782 DRAM1Q8N682 238 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 OR4M2Q8NGB6 313 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 DTD1Q8TEA8 209 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 C16orf78Q8WTQ4 265 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 CASTOR1Q8WTX7 329 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 CYGBQ8WWM9 190 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 CCL17Q92583 94 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 GHSRQ92847 366 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 FMC1Q96HJ9 113 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 SLC35E1Q96K37 410 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 TAAR1Q96RJ0 339 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 HDHD3Q9BSH5 251 aaPredicted RBP2.7□□□□□ -1.98
TDP1-217ENST00000557782 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 OR51E2Q9H255 320 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 MDFICQ9P1T7 246 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 PAK5Q9P286 719 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 ZNF337Q9Y3M9 751 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 TSPOAP1O95153 1857 aa2.7□□□□□ -1.98
TDP1-217ENST00000557782 RIMS2Q9UQ26 1411 aa2.69□□□□□ -1.98
TDP1-217ENST00000557782 SIGLEC1Q9BZZ2 1709 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms