RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DAPP51397 102 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 CBX1P83916 185 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 MEF2CQ06413 473 aaPredicted RBP12.82□□□□□ -0.36
SCFD1-224ENST00000557713 AADACL4Q5VUY2 407 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 FAHD1Q6P587 224 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 PLEKHG7Q6ZR37 379 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 GDPD3Q7L5L3 318 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 TCF23Q7RTU1 214 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 SLC35F2Q8IXU6 374 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 WFDC9Q8NEX5 89 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 PHF21AQ96BD5 680 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 NRBF2Q96F24 287 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 OR5M11Q96RB7 305 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
SCFD1-224ENST00000557713 PAPOLBQ9NRJ5 636 aaKnown RBP12.82□□□□□ -0.36
SCFD1-224ENST00000557713 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCFD1-224ENST00000557713 IGKV1-27A0A075B6S5 117 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 FAM230AA0A1W2PPH8 454 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 TMEM82A0PJX8 343 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 FKBP6O75344 327 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 EDDM3BP56851 147 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 OR12D2P58182 307 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 DYNC1I2Q13409 638 aaKnown RBP12.81□□□□□ -0.36
SCFD1-224ENST00000557713 UBE2V2Q15819 145 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 MINOS1Q5TGZ0 78 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 OR8H2Q8N162 312 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
SCFD1-224ENST00000557713 SNX22Q96L94 193 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 CEP19Q96LK0 163 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 ZNF714Q96N38 554 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 OCSTAMPQ9BR26 566 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 CADM1Q9BY67 442 aaKnown RBP12.81□□□□□ -0.36
SCFD1-224ENST00000557713 SEBOXQ9HB31 216 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-224ENST00000557713 CLN6Q9NWW5 311 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 HILPDAQ9Y5L2 63 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 MINOS1-NBL1R4GNA1 71 aa12.81□□□□□ -0.36
SCFD1-224ENST00000557713 TCRBV3S1A0A5B6 114 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 ZNF670-ZNF695F2Z2N8 137 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 PEX14O75381 377 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 ACTA2P62736 377 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 ACTG2P63267 376 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 ACTC1P68032 377 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 ACTA1P68133 377 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 CD83Q01151 205 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 FOXB2Q5VYV0 432 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 NXNL2Q5VZ03 156 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 SPATA24Q86W54 205 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 TCEANCQ8N8B7 351 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 OR52N4Q8NGI2 321 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 H2AFY2Q9P0M6 372 aaPredicted RBP12.8□□□□□ -0.36
SCFD1-224ENST00000557713 SLC7A11Q9UPY5 501 aa12.8□□□□□ -0.36
SCFD1-224ENST00000557713 hADV38S2A0JD32 116 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 M0R129 80 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 F2RL2O00254 374 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 VDAC2P45880 294 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-224ENST00000557713 FUT6P51993 359 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 TMEM95Q3KNT9 176 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 SLX4IPQ5VYV7 408 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 SSX6Q7RTT6 188 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 CATSPERDQ86XM0 798 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 EGFL6Q8IUX8 553 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 CCDC197Q8NCU1 140 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 TMEM163Q8TC26 289 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 UTP4Q969X6 686 aaKnown RBP12.79□□□□□ -0.36
SCFD1-224ENST00000557713 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 LINC00312Q9Y6C7 94 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 SESN1Q9Y6P5 492 aa12.79□□□□□ -0.36
SCFD1-224ENST00000557713 IGHV2-26A0A0B4J1V2 119 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 INMTO95050 263 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 RPP14O95059 124 aaKnown RBP12.78□□□□□ -0.36
SCFD1-224ENST00000557713 FAM107AO95990 144 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 ALDOBP05062 364 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 IGLL1P15814 213 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 EPHA2P29317 976 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 SLC34A1Q06495 639 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 FLOT2Q14254 428 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 ARSJQ5FYB0 599 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-224ENST00000557713 SLC25A26Q70HW3 274 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 ZNF676Q8N7Q3 588 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 TPRX1Q8N7U7 411 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 OR5AU1Q8NGC0 362 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 PRRG3Q9BZD7 231 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 TMEM133Q9H2Q1 129 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 NOTCH3Q9UM47 2321 aa12.78□□□□□ -0.36
SCFD1-224ENST00000557713 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.36
SCFD1-224ENST00000557713 ZAR1LA6NP61 321 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 H3BSH0 61 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 SYT7O43581 403 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 MITFO75030 526 aaPredicted RBP12.77□□□□□ -0.37
SCFD1-224ENST00000557713 HAND1O96004 215 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 IGHA1P01876 353 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 KRT8P05787 483 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 AZGP1P25311 298 aaKnown RBP12.77□□□□□ -0.37
SCFD1-224ENST00000557713 PEX2P28328 305 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 EDDM3AQ14507 147 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 C12orf73Q69YU5 71 aa12.77□□□□□ -0.37
SCFD1-224ENST00000557713 YIPF7Q8N8F6 280 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms