RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
SLIRP-211ENST00000557623 IZUMO2Q6UXV1 221 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 SLC25A26Q70HW3 274 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 BPIFB2Q8N4F0 458 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 OR13C9Q8NGT0 318 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
SLIRP-211ENST00000557623 SLAMF9Q96A28 289 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 CNTD2Q9H8S5 307 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 MTCH1Q9NZJ7 389 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 DUX4Q9UBX2 424 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 TPRKBQ9Y3C4 175 aa10.34□□□□□ -0.75
SLIRP-211ENST00000557623 PTGES3LE9PB15 166 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 MAGEB3O15480 346 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 FCN3O75636 299 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 TOX4O94842 621 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 HCKP08631 526 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 NDUFB7P17568 137 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 RAB3AP20336 220 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 C21orf33P30042 268 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-211ENST00000557623 POU3F4P49335 361 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 CAPZA1P52907 286 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 BPIFB3P59826 476 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 FGF12P61328 243 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 PDZK1IP1Q13113 114 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 YIF1BQ5BJH7 314 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 DMKNQ6E0U4 476 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-211ENST00000557623 USP43Q70EL4 1123 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 CMTM4Q8IZR5 234 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 NANOGP1Q8N7R0 232 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 ZNF485Q8NCK3 441 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 LY6G5BQ8NDX9 201 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 TMEM185AQ8NFB2 350 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 C8orf46Q8TAG6 207 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 EDARADDQ8WWZ3 215 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 TMEM158Q8WZ71 300 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 WDFY2Q96P53 400 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 JMJD8Q96S16 334 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 DCTN5Q9BTE1 182 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 MND1Q9BWT6 205 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 RHOFQ9HBH0 211 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 OR14J1Q9UGF5 321 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 MAB21L2Q9Y586 359 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 PCDHGB5Q9Y5G0 923 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 KPTNQ9Y664 436 aa10.33□□□□□ -0.76
SLIRP-211ENST00000557623 SIRT4Q9Y6E7 314 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-211ENST00000557623 TRBV23-1A0A0A0MS06 115 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 LALBAP00709 142 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 CD1AP06126 327 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 CHRM2P08172 466 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 SELLP14151 372 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 VHLP40337 213 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 SOX2P48431 317 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 PDCD1Q15116 288 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 KLF17Q5JT82 389 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-211ENST00000557623 GPR157Q5UAW9 335 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 SAXO1Q8IYX7 474 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 BATF2Q8N1L9 274 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 FGFRL1Q8N441 504 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 CD177Q8N6Q3 437 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 KIR3DL3Q8N743 410 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 ZSCAN4Q8NAM6 433 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-211ENST00000557623 ZNRF1Q8ND25 227 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 RGP1Q92546 391 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-211ENST00000557623 GHSRQ92847 366 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 EMG1Q92979 244 aaKnown RBP10.32□□□□□ -0.76
SLIRP-211ENST00000557623 TMEM106AQ96A25 262 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 PCGF1Q9BSM1 259 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 CDCA4Q9BXL8 241 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 MS4A7Q9GZW8 240 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-211ENST00000557623 FAM234AQ9H0X4 552 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 SEBOXQ9HB31 216 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-211ENST00000557623 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 RAB26Q9ULW5 256 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 SVEP1Q4LDE5 3571 aa10.32□□□□□ -0.76
SLIRP-211ENST00000557623 DSCAML1Q8TD84 2053 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 SPRY1O43609 319 aaPredicted RBP10.31□□□□□ -0.76
SLIRP-211ENST00000557623 TFF1P04155 84 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 ALDOBP05062 364 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 MMP9P14780 707 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 ARF6P62330 175 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 PPP3R1P63098 170 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 SLC35A2P78381 396 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 BDH1Q02338 343 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 ACSM1Q08AH1 577 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 BLMHQ13867 455 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 KISS1Q15726 138 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 Q499Y3 187 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 ZNF529Q6P280 563 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 RBMS3Q6XE24 437 aaKnown RBP10.31□□□□□ -0.76
SLIRP-211ENST00000557623 FAM58AQ8N1B3 248 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 ZFP41Q8N8Y5 198 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 TBC1D15Q8TC07 691 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 THRSPQ92748 146 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 RFT1Q96AA3 541 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 PGLYRP3Q96LB9 341 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 CNBD2Q96M20 576 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 SLC6A7Q99884 636 aa10.31□□□□□ -0.76
SLIRP-211ENST00000557623 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms