RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CDKN2BP42772 138 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CRYBB2P43320 205 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RAB7AP51149 207 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR10A3P58181 314 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 DSCR10P59022 87 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RPS6P62753 249 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 BTG2P78543 158 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 VLDLRP98155 873 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 MLLT11Q13015 90 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 KIAA0040Q15053 153 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 TMED2Q15363 201 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 KCTD19Q17RG1 926 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SLC22A6Q4U2R8 563 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ACSM3Q53FZ2 586 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SFT2D3Q587I9 215 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 LY6G6FQ5SQ64 297 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 TPRG1LQ5T0D9 272 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 IDNKQ5T6J7 187 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF836Q6ZNA1 936 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 GLT6D1Q7Z4J2 308 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 DHDDSQ86SQ9 333 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SLC25A42Q86VD7 318 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PPP1R27Q86WC6 154 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CALHM3Q86XJ0 350 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SKA3Q8IX90 412 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CLDN19Q8N6F1 224 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 TMEM251Q8N6I4 163 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ACBD7Q8N6N7 88 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SLC26A10Q8NG04 563 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR5T3Q8NGG3 340 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR52L1Q8NGH7 329 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR4P4Q8NGL7 312 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PIFOQ8TCI5 191 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SPPL2BQ8TCT7 592 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 GPR151Q8TDV0 419 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RPL3LQ92901 407 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ART4Q93070 314 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 C8orf44Q96CB5 159 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 GPR146Q96CH1 333 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 TECTBQ96PL2 329 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SIGLEC12Q96PQ1 595 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR5B12Q96R08 314 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR7D2Q96RA2 312 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 MND1Q9BWT6 205 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 DUSP16Q9BY84 665 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PTGES2Q9H7Z7 377 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF702PQ9H963 129 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RHOFQ9HBH0 211 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 KCNIP3Q9Y2W7 256 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 POLR3HQ9Y535 204 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ADGRL1O94910 1474 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PLXND1Q9Y4D7 1925 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RBBP6Q7Z6E9 1792 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ASXL1Q8IXJ9 1541 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PEAK1Q9H792 1746 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CRYBG1Q9Y4K1 1723 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR6C6A6NF89 314 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PLPP3O14495 311 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 GOSR2O14653 212 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PHOX2AO14813 284 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 GCM2O75603 506 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 BCHEP06276 602 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 KLK1P06870 262 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 BPGMP07738 259 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 H2BFMP0C1H6 154 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 LIPCP11150 499 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 IGHV1-2P23083 117 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZBTB25P24278 435 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CXCR1P25024 350 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 FASP25445 335 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SRIP30626 198 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 S100A7P31151 101 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 GGT2P36268 569 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 NBL1P41271 181 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 TIMM10P62072 90 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 TBPL1P62380 186 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 SKP2Q13309 424 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 C1orf61Q13536 156 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 EXOSC2Q13868 293 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 VGLL4Q14135 290 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CRMP1Q14194 572 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 FLOT2Q14254 428 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CARTPTQ16568 116 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 NCMAPQ5T1S8 102 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 PRSS54Q6PEW0 395 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 CD200R1LQ6Q8B3 271 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 FBXW12Q6X9E4 464 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 Q6ZT83 130 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 AHSA2Q719I0 299 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 STRADAQ7RTN6 431 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 HSD11B1LQ7Z5J1 315 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 BAP18Q8IXM2 172 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR6V1Q8N148 313 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 LRRC25Q8N386 305 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZNF525Q8N782 197 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 ZSCAN4Q8NAM6 433 aaPredicted RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR13C8Q8NGS7 320 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 OR4X1Q8NH49 305 aa1.27□□□□□ -2.21
HIF1A-212ENST00000557538 RNASEH2CQ8TDP1 164 aaKnown RBP1.27□□□□□ -2.21
HIF1A-212ENST00000557538 DNAJA3Q96EY1 480 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms