RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MRPL45Q9BRJ2 306 aaKnown RBP3.24□□□□□ -1.89
PRPF39-212ENST00000557477 ZNF2Q9BSG1 426 aaPredicted RBP3.24□□□□□ -1.89
PRPF39-212ENST00000557477 TMEM109Q9BVC6 243 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 UCK2Q9BZX2 261 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 DNTTIP1Q9H147 329 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 FBXO44Q9H4M3 255 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 REEP4Q9H6H4 257 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 ANKHQ9HCJ1 492 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 SIRT7Q9NRC8 400 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 TREX1Q9NSU2 369 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 FAM49BQ9NUQ9 324 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 KIF25Q9UIL4 384 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 NAGKQ9UJ70 344 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 SSR3Q9UNL2 185 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 FLNBO75369 2602 aaKnown RBP3.24□□□□□ -1.89
PRPF39-212ENST00000557477 HELZP42694 1942 aaKnown RBP3.24□□□□□ -1.89
PRPF39-212ENST00000557477 MYO16Q9Y6X6 1858 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 PCM1Q15154 2024 aa3.24□□□□□ -1.89
PRPF39-212ENST00000557477 ASH1LQ9NR48 2969 aaKnown RBP3.24□□□□□ -1.89
PRPF39-212ENST00000557477 TNRC6BQ9UPQ9 1833 aaKnown RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 PCDH15Q96QU1 1955 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 IGHV1OR21-1A0A087WYE8 117 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 A0A0J9YXY3 114 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TCRBV9S1A1TA0A576 114 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SUPT3HB4E1H0 165 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 H3BNH8 94 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 DNASE2O00115 360 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 KPNA3O00505 521 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 PRMT5O14744 637 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 HCRTR1O43613 425 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SCN2BO60939 215 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 OBSL1O75147 1896 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 KCNK2O95069 426 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TSPAN12O95859 305 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 FGGP02679 453 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 PPBPP02775 128 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 RLN2P04090 185 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 MUC1P15941 1255 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TUBG1P23258 451 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 CA5AP35218 305 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 RFC3P40938 356 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 RPS5P46782 204 aaKnown RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SERPINB10P48595 397 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 CAV2P51636 162 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 DEFA1P59665 94 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 DEFA3P59666 94 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 UBE2G2P60604 165 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ARF6P62330 175 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 MRPS22P82650 360 aaKnown RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TNFRSF9Q07011 255 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 BIKQ13323 160 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 IL18Q14116 193 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 MPPED2Q15777 294 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 GOLGA7BQ2TAP0 167 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 HIKESHIQ53FT3 197 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 COQ5Q5HYK3 327 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 OR2A2Q6IF42 318 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 FRMPD2BQ6IN97 320 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SPESP1Q6UW49 350 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 LRRN1Q6UXK5 716 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 IGSF10Q6WRI0 2623 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 IL34Q6ZMJ4 242 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 OFCC1Q8IZS5 231 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TCTE3Q8IZS6 198 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 C6orf223Q8N319 242 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 FTMTQ8N4E7 242 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ARRDC1Q8N5I2 433 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ATPAF2Q8N5M1 289 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 EIF4E3Q8N5X7 224 aaKnown RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 OR4M1Q8NGD0 313 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ACTL9Q8TC94 416 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 RAB2BQ8WUD1 216 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 DEDD2Q8WXF8 326 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SEC22AQ96IW7 307 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 PACRGQ96M98 296 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 CLCC1Q96S66 551 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 HBEGFQ99075 208 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TEAD3Q99594 435 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 KLF6Q99612 283 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 EBNA1BP2Q99848 306 aaKnown RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TMED9Q9BVK6 235 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 GGACTQ9BVM4 153 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ROPN1BQ9BZX4 212 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ING2Q9H160 280 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 OR52A5Q9H2C5 316 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 MIXL1Q9H2W2 232 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ZDHHC11Q9H8X9 412 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 NHEJ1Q9H9Q4 299 aaPredicted RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 NANOGQ9H9S0 305 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 CXorf21Q9HAI6 301 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SGK2Q9HBY8 427 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 DYRK4Q9NR20 520 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 TUBG2Q9NRH3 451 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 FBXL12Q9NXK8 326 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 RWDD2AQ9UIY3 292 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 ZNF225Q9UK10 706 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 SCML1Q9UN30 329 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 RPL36Q9Y3U8 105 aaKnown RBP3.23□□□□□ -1.89
PRPF39-212ENST00000557477 PEX16Q9Y5Y5 336 aa3.23□□□□□ -1.89
PRPF39-212ENST00000557477 V9GY05 133 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms