RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 HOGA1Q86XE5 327 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 BAP18Q8IXM2 172 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 MKXQ8IYA7 352 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 OR51H1Q8NH63 302 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 KCNE4Q8WWG9 221 aa13.35□□□□□ -0.27
TMEM55B-207ENST00000557041 TSC22D1Q15714 1073 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 PAN3Q58A45 887 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 CXorf67Q86X51 503 aaPredicted RBP13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 OR6K3Q8NGY3 331 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 EMG1Q92979 244 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 MRPL24Q96A35 216 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 PTX4Q96A99 478 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 DHRS9Q9BPW9 319 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 TNFSF18Q9UNG2 199 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 AKAP6Q13023 2319 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 TMEM265A0A087WTH1 108 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 LOC390937A0A1W2PQ73 354 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 MT-CO3P00414 261 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 GRPP07492 148 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 OR5AC1P0C628 307 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 RCC1P18754 421 aaPredicted RBP13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 RPL7L1Q6DKI1 246 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 NECAP2Q9NVZ3 263 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 LOC102723996A0A087X1L8 192 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 MFNGO00587 321 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 HGFACQ04756 655 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 ARL6IP1Q15041 203 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 DCAF10Q5QP82 559 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 ZNF695Q8IW36 515 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 TMEM123Q8N131 208 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 KCNRGQ8N5I3 272 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 OR2M7Q8NG81 312 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 ANXA10Q9UJ72 324 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 GPR132Q9UNW8 380 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 ASPMQ8IZT6 3477 aa13.34□□□□□ -0.27
TMEM55B-207ENST00000557041 CNR1P21554 472 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 FPR2P25090 351 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 AKR1C3P42330 323 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 VAMP2P63027 116 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 H3F3AP84243 136 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 CLN3Q13286 438 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 FAM76BQ5HYJ3 339 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 BPIFCQ8NFQ6 507 aa13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 EIF5A2Q9GZV4 153 aaKnown RBP13.33□□□□□ -0.27
TMEM55B-207ENST00000557041 KRBOX1C9JBD0 128 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 NTN3O00634 580 aaPredicted RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 TBPP20226 339 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 SLC10A1Q14973 349 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 LTC4SQ16873 150 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 STOML3Q8TAV4 291 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 ZNF133P52736 654 aaPredicted RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 UBE2NP61088 152 aaKnown RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 ZNF239Q16600 458 aaKnown RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 PNLIPRP3Q17RR3 467 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 OR2A2Q6IF42 318 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 RGS7BPQ6MZT1 257 aaPredicted RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 JMJD6Q6NYC1 403 aaPredicted RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 LYZL2Q7Z4W2 148 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 CALHM1Q8IU99 346 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 INTS12Q96CB8 462 aaKnown RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 DMRTA2Q96SC8 542 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 FAM173AQ9BQD7 235 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 TAF9BQ9HBM6 251 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 FZR1Q9UM11 496 aa13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 HEATR1Q9H583 2144 aaKnown RBP13.33□□□□□ -0.28
TMEM55B-207ENST00000557041 ZNF816-ZNF321PA0A0X1KG74 233 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 ANKRD30BLA7E2S9 258 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 H3BP45 60 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 CA6P23280 308 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 HOXC12P31275 282 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 IGSF11Q5DX21 431 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 PSMF1Q92530 271 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 ARL11Q969Q4 196 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 MARC2Q969Z3 335 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 NABP1Q96AH0 204 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 C2orf50Q96LR7 162 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 IL36RNQ9UBH0 155 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 CEP192Q8TEP8 1941 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 MED13LQ71F56 2210 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 IGLV3-32A0A0A0MS00 114 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 TTLL8A6PVC2 850 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 C9orf172C9J069 976 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 B3GALNT1O75752 331 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 TK1P04183 234 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 CD46P15529 392 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 MEOX1P50221 254 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 OR10AD1Q8NGE0 317 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 SPSB1Q96BD6 273 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 PLPPR2Q96GM1 343 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 WNT5BQ9H1J7 359 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 UFSP2Q9NUQ7 469 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 STARD10Q9Y365 291 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 OTOGLQ3ZCN5 2332 aa13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 SPTBN1Q01082 2364 aaKnown RBP13.32□□□□□ -0.28
TMEM55B-207ENST00000557041 COL6A6A6NMZ7 2263 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms