RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ACTR6Q9GZN1 396 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 CHST5Q9GZS9 411 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 CST11Q9H112 138 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 AUNIPQ9H7T9 357 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 TMEM140Q9NV12 185 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 ING4Q9UNL4 249 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 SLC7A11Q9UPY5 501 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 RBMX2Q9Y388 322 aaKnown RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 NUBP2Q9Y5Y2 271 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 GTF3C1Q12789 2109 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 DOCK7Q96N67 2140 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 A0A0G2JNJ9 132 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ZNF816-ZNF321PA0A0X1KG74 233 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ANKRD20A5PA0PJZ0 165 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 C5orf49A4QMS7 147 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 C5orf63A6NC05 138 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 HMX3A6NHT5 357 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 H7C417 338 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 TCRBP04435 133 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CRHP06850 196 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 TRAPPC2P0DI81 140 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 TRAPPC2BP0DI82 140 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CCNOP22674 350 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 GIFP27352 417 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ALDH3B1P43353 468 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 SRP9P49458 86 aaKnown RBP5.86□□□□□ -1.47
SLIRP-204ENST00000555890 FUT6P51993 359 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ATP1B3P54709 279 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 RAG2P55895 527 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ACTBP60709 375 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ACTG1P63261 375 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 QRFPP83859 136 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 PLA2G7Q13093 441 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ARL6IP1Q15041 203 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 KISS1Q15726 138 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 UBE2V2Q15819 145 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ACSF3Q4G176 576 aaPredicted RBP5.86□□□□□ -1.47
SLIRP-204ENST00000555890 PLA1AQ53H76 456 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 FBLN7Q53RD9 439 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CLVS2Q5SYC1 327 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 NSUN5P2Q63ZY6 315 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 TMEM200BQ69YZ2 307 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OR10K2Q6IF99 312 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 MTFR2Q6P444 385 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CFAP161Q6P656 301 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 DNM1P46Q6ZS02 220 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 COLCA1Q6ZS62 124 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 BTN2A1Q7KYR7 527 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 MRPL21Q7Z2W9 205 aaKnown RBP5.86□□□□□ -1.47
SLIRP-204ENST00000555890 FTMTQ8N4E7 242 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 STPG3Q8N7X2 389 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CNEP1R1Q8N9A8 125 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CHST4Q8NCG5 386 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 CPEB3Q8NE35 698 aaKnown RBP5.86□□□□□ -1.47
SLIRP-204ENST00000555890 STEAP2Q8NFT2 490 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OR56B1Q8NGI3 324 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OR5L1Q8NGL2 311 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OR5M9Q8NGP3 310 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OR6K3Q8NGY3 331 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OR2AE1Q8NHA4 323 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 TNFAIP8L1Q8WVP5 186 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 SPSB4Q96A44 273 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 BORCS8Q96FH0 119 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 TAAR6Q96RI8 345 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 KCNK15Q9H427 330 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 OPA3Q9H6K4 179 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 HRASLSQ9HDD0 168 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 PCDHB16Q9NRJ7 776 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 MYEF2Q9P2K5 600 aaKnown RBP5.86□□□□□ -1.47
SLIRP-204ENST00000555890 MTFP1Q9UDX5 166 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 Q9UFV3 132 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 KCNN3Q9UGI6 736 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 ZDHHC8Q9ULC8 765 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 RHBDD3Q9Y3P4 386 aa5.86□□□□□ -1.47
SLIRP-204ENST00000555890 INTS1Q8N201 2190 aaKnown RBP5.86□□□□□ -1.47
SLIRP-204ENST00000555890 LOC100509620A0A075B734 347 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 IGKV1-9A0A0C4DH69 117 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 hCG_38984A0A1B0GV85 526 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 FAM230AA0A1W2PPH8 454 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 TMEM14DPA8MWL7 114 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 PAX4O43316 350 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 GMDSO60547 372 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 CDC14BO60729 498 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 WDR1O75083 606 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 CRTAPO75718 401 aaPredicted RBP5.85□□□□□ -1.47
SLIRP-204ENST00000555890 CCNKO75909 580 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 KDM4BO94953 1096 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 NRASP01111 189 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 MT-ND4P03905 459 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 HOXD4P09016 255 aaPredicted RBP5.85□□□□□ -1.47
SLIRP-204ENST00000555890 AKAIN1P0CW23 69 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 TMEM225BP0DP42 221 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 GTF2F2P13984 249 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 PSMB1P20618 241 aaKnown RBP5.85□□□□□ -1.47
SLIRP-204ENST00000555890 RCVRNP35243 200 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 PTGFRP43088 359 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 OR3A4PP47883 348 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 RBP2P50120 134 aa5.85□□□□□ -1.47
SLIRP-204ENST00000555890 FOXG1P55316 489 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms