RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PARP16Q8N5Y8 322 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 ASCC1Q8N9N2 400 aaKnown RBP10.01□□□□□ -0.81
SRP54-206ENST00000555317 ZNRF1Q8ND25 227 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 TMEM106AQ96A25 262 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 RFT1Q96AA3 541 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 WDFY2Q96P53 400 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 SPACA5Q96QH8 159 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 GPER1Q99527 375 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 DCTN5Q9BTE1 182 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 MND1Q9BWT6 205 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 HES4Q9HCC6 221 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 CKLFQ9UBR5 152 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 ZNF222Q9UK12 451 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 TPRKBQ9Y3C4 175 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 KPTNQ9Y664 436 aa10.01□□□□□ -0.81
SRP54-206ENST00000555317 PNMA8CA0A1B0GUJ8 204 aa10□□□□□ -0.81
SRP54-206ENST00000555317 A0A1W2PPH5 198 aa10□□□□□ -0.81
SRP54-206ENST00000555317 SPRY1O43609 319 aaPredicted RBP10□□□□□ -0.81
SRP54-206ENST00000555317 SFTPBP07988 381 aa10□□□□□ -0.81
SRP54-206ENST00000555317 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
SRP54-206ENST00000555317 TMEM225BP0DP42 221 aa10□□□□□ -0.81
SRP54-206ENST00000555317 PRKACAP17612 351 aa10□□□□□ -0.81
SRP54-206ENST00000555317 MYF6P23409 242 aa10□□□□□ -0.81
SRP54-206ENST00000555317 C21orf33P30042 268 aaPredicted RBP10□□□□□ -0.81
SRP54-206ENST00000555317 CEBPDP49716 269 aaPredicted RBP10□□□□□ -0.81
SRP54-206ENST00000555317 SRSF2Q01130 221 aaKnown RBP10□□□□□ -0.81
SRP54-206ENST00000555317 PDZK1IP1Q13113 114 aa10□□□□□ -0.81
SRP54-206ENST00000555317 RIPK1Q13546 671 aa10□□□□□ -0.81
SRP54-206ENST00000555317 YIF1BQ5BJH7 314 aa10□□□□□ -0.81
SRP54-206ENST00000555317 KLF17Q5JT82 389 aaPredicted RBP10□□□□□ -0.81
SRP54-206ENST00000555317 XAF1Q6GPH4 301 aa10□□□□□ -0.81
SRP54-206ENST00000555317 LAIR2Q6ISS4 152 aa10□□□□□ -0.81
SRP54-206ENST00000555317 SATL1Q86VE3 508 aa10□□□□□ -0.81
SRP54-206ENST00000555317 FAM58AQ8N1B3 248 aa10□□□□□ -0.81
SRP54-206ENST00000555317 CD177Q8N6Q3 437 aa10□□□□□ -0.81
SRP54-206ENST00000555317 KIR3DL3Q8N743 410 aa10□□□□□ -0.81
SRP54-206ENST00000555317 ZFP41Q8N8Y5 198 aa10□□□□□ -0.81
SRP54-206ENST00000555317 OR5D18Q8NGL1 313 aa10□□□□□ -0.81
SRP54-206ENST00000555317 GHSRQ92847 366 aa10□□□□□ -0.81
SRP54-206ENST00000555317 DMRTB1Q96MA1 342 aa10□□□□□ -0.81
SRP54-206ENST00000555317 ANKRD60Q9BZ19 345 aa10□□□□□ -0.81
SRP54-206ENST00000555317 TAS2R4Q9NYW5 299 aa10□□□□□ -0.81
SRP54-206ENST00000555317 MTCH1Q9NZJ7 389 aa10□□□□□ -0.81
SRP54-206ENST00000555317 ZNF69Q9UC07 566 aa10□□□□□ -0.81
SRP54-206ENST00000555317 TRIM77I1YAP6 450 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 OGG1O15527 345 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 FCN3O75636 299 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 ALX3O95076 343 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 CDK1P06493 297 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 CHRM2P08172 466 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 AMY2BP19961 511 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 BCL3P20749 454 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 VHLP40337 213 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 SNU13P55769 128 aaKnown RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 BPIFB3P59826 476 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 HILS1P60008 231 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 RPL31P62899 125 aaKnown RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 COL10A1Q03692 680 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 KISS1Q15726 138 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 DMKNQ6E0U4 476 aaPredicted RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 GDPD3Q7L5L3 318 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 VMO1Q7Z5L0 202 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 SIGLECL1Q8N7X8 197 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 ZSCAN4Q8NAM6 433 aaPredicted RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 C8orf46Q8TAG6 207 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 TBC1D15Q8TC07 691 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 RGP1Q92546 391 aaPredicted RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 LHX4Q969G2 390 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 MDFIQ99750 246 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 FAM192AQ9GZU8 254 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 FAM234AQ9H0X4 552 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 ELL3Q9HB65 397 aaPredicted RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 RBFOX1Q9NWB1 397 aaKnown RBP9.99□□□□□ -0.81
SRP54-206ENST00000555317 MAB21L2Q9Y586 359 aa9.99□□□□□ -0.81
SRP54-206ENST00000555317 hCG_1809904A0A1W2PP81 198 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 A0A1W2PPE2 198 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 A0A1W2PR64 198 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 A0A1W2PRV1 198 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 ANGPTL7O43827 346 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 HAND1O96004 215 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 LALBAP00709 142 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 TK1P04183 234 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 MMP9P14780 707 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 CELP19835 753 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 GABRR1P24046 479 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 EEF1B2P24534 225 aaKnown RBP9.98□□□□□ -0.81
SRP54-206ENST00000555317 MAPK3P27361 379 aaPredicted RBP9.98□□□□□ -0.81
SRP54-206ENST00000555317 Q499Y3 187 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 SPIN3Q5JUX0 258 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 BRD3OSQ6XYD6 125 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 SAXO1Q8IYX7 474 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 LY6G5BQ8NDX9 201 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 OR5D13Q8NGL4 314 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 PPP1R35Q8TAP8 253 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 RPS4Y2Q8TD47 263 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 ZFAND2BQ8WV99 257 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 THRSPQ92748 146 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
SRP54-206ENST00000555317 CNBD2Q96M20 576 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms