RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 DUX4L2P0CJ85 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 DUX4L3P0CJ86 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 DUX4L4P0CJ87 422 aa15□□□□□ -0.01
SHOX-204ENST00000554971 DUX4L5P0CJ88 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 DUX4L6P0CJ89 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 DUX4L7P0CJ90 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 IGFBP2P18065 325 aa15□□□□□ -0.01
SHOX-204ENST00000554971 PPA1Q15181 289 aa15□□□□□ -0.01
SHOX-204ENST00000554971 CXorf67Q86X51 503 aaPredicted RBP15□□□□□ -0.01
SHOX-204ENST00000554971 FAM89BQ8N5H3 189 aa15□□□□□ -0.01
SHOX-204ENST00000554971 OR4S1Q8NGB4 309 aa15□□□□□ -0.01
SHOX-204ENST00000554971 RAB3CQ96E17 227 aa15□□□□□ -0.01
SHOX-204ENST00000554971 PHB2Q99623 299 aa15□□□□□ -0.01
SHOX-204ENST00000554971 TMEM59Q9BXS4 323 aa15□□□□□ -0.01
SHOX-204ENST00000554971 LINC00470Q9BZP3 86 aa15□□□□□ -0.01
SHOX-204ENST00000554971 DUX4Q9UBX2 424 aa15□□□□□ -0.01
SHOX-204ENST00000554971 KLF2Q9Y5W3 355 aaPredicted RBP15□□□□□ -0.01
SHOX-204ENST00000554971 MAP1AP78559 2803 aaPredicted RBP14.99□□□□□ -0.01
SHOX-204ENST00000554971 DHRS7CA6NNS2 312 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 I3L521 148 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 DHHO43323 396 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 CDC14BO60729 498 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 CA11O75493 328 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 MTRF1O75570 445 aaKnown RBP14.99□□□□□ -0.01
SHOX-204ENST00000554971 LYZL6O75951 148 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 OR2F2O95006 317 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 HLA-AP01891 365 aaKnown RBP14.99□□□□□ -0.01
SHOX-204ENST00000554971 HCKP08631 526 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 HIST1H1DP16402 221 aaKnown RBP14.99□□□□□ -0.01
SHOX-204ENST00000554971 MGMTP16455 207 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 OTX1P32242 354 aaPredicted RBP14.99□□□□□ -0.01
SHOX-204ENST00000554971 ZNF84P51523 738 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 ARPC4P59998 168 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 OR2F1Q13607 317 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 SGCAQ16586 387 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 C9orf135Q5VTT2 229 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 FAM57BQ71RH2 274 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 PGAM5Q96HS1 289 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 CRLF2Q9HC73 371 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 VSIG4Q9Y279 399 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 KCNK7Q9Y2U2 307 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 V9GYS6 101 aa14.99□□□□□ -0.01
SHOX-204ENST00000554971 HEATR1Q9H583 2144 aaKnown RBP14.99□□□□□ -0.01
SHOX-204ENST00000554971 OR5H14A6NHG9 310 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 SORDQ00796 357 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 ZNF546Q86UE3 836 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 HOGA1Q86XE5 327 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 OR4K15Q8NH41 348 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 RBPMSQ93062 196 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 WDR89Q96FK6 387 aaPredicted RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 ELOVL5Q9NYP7 299 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 RDH8Q9NYR8 311 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 ZNF319Q9P2F9 582 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 NOP16Q9Y3C1 178 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 SESN1Q9Y6P5 492 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 hCG_1807616A0A1W2PRN6 198 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 C9orf170A2RU37 121 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 RPL36A-HNRNPH2H7BZ11 118 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 SSX5O60225 188 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 DHRS3O75911 302 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 DUS4LO95620 317 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 GNB3P16520 340 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 MPGP29372 298 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 HRH1P35367 487 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 RPS27AP62979 156 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 UBA52P62987 128 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 MRPS34P82930 218 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 ENDOGQ14249 297 aaKnown RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 P2RY6Q15077 328 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 SFRP5Q5T4F7 317 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 RGS7BPQ6MZT1 257 aaPredicted RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 TERB2Q8NHR7 220 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 NUDCD2Q8WVJ2 157 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 CMBLQ96DG6 245 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 FAM71F1Q96KD3 344 aaPredicted RBP14.98□□□□□ -0.01
SHOX-204ENST00000554971 GPR35Q9HC97 309 aa14.98□□□□□ -0.01
SHOX-204ENST00000554971 A0A0B4J2A0 478 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 MPIG6BO95866 241 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 NAT2P11245 290 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 IL13RA1P78552 427 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 CYCSP99999 105 aaKnown RBP14.97□□□□□ -0.01
SHOX-204ENST00000554971 NKPD1Q17RQ9 610 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 FAM27BQ5VT28 67 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 SIGIRRQ6IA17 410 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 OR52H1Q8NGJ2 320 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 SUN5Q8TC36 379 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 LRRC20Q8TCA0 184 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 SPTSSAQ969W0 71 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 NABP1Q96AH0 204 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 GPER1Q99527 375 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 DHRS9Q9BPW9 319 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 SLC25A32Q9H2D1 315 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 SHPKQ9UHJ6 478 aa14.97□□□□□ -0.01
SHOX-204ENST00000554971 TRAV14DV4A0A0A6YYC5 116 aa14.96□□□□□ -0.01
SHOX-204ENST00000554971 PRSS44E7EML9 344 aa14.96□□□□□ -0.01
SHOX-204ENST00000554971 ZNF587BE7ETH6 402 aa14.96□□□□□ -0.01
SHOX-204ENST00000554971 NMBP08949 121 aa14.96□□□□□ -0.01
SHOX-204ENST00000554971 PTGFRP43088 359 aa14.96□□□□□ -0.01
SHOX-204ENST00000554971 CEACAM16Q2WEN9 425 aa14.96□□□□□ -0.01
SHOX-204ENST00000554971 C11orf87Q6NUJ2 197 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms