RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 DMRTA1Q5VZB9 504 aa14.56□□□□□ -0.08
PCNX1-209ENST00000554879 PPP1R1CQ8WVI7 109 aa14.56□□□□□ -0.08
PCNX1-209ENST00000554879 CST11Q9H112 138 aa14.56□□□□□ -0.08
PCNX1-209ENST00000554879 ALX4Q9H161 411 aaPredicted RBP14.56□□□□□ -0.08
PCNX1-209ENST00000554879 POLEQ07864 2286 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 RAB4AP20338 218 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 IL13RA1P78552 427 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 HABP2Q14520 560 aaPredicted RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 FADS6Q8N9I5 356 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 CCDC54Q8NEL0 328 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 RASL12Q9NYN1 266 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 ZNF230Q9UIE0 474 aaPredicted RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 C5orf49A4QMS7 147 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 PGAM2P15259 253 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 TMEM11P17152 192 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 TMEM82A0PJX8 343 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 PINLYPA6NC86 204 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 TNRC18O15417 2968 aaPredicted RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 IDH3GP51553 393 aaPredicted RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 SUCLG1P53597 346 aaKnown RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 PKIAP61925 76 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 PMPCAQ10713 525 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 RSPO4Q2I0M5 234 aaPredicted RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 NANOS1Q8WY41 292 aaKnown RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 C14orf144Q96I85 54 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 KCNJ15Q99712 375 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 SNRPCP09234 159 aaKnown RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 ZNF17P17021 662 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 MRPL49Q13405 166 aaKnown RBP14.55□□□□□ -0.08
PCNX1-209ENST00000554879 DOK3Q7L591 496 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 FDCSPQ8NFU4 85 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 OR5V1Q9UGF6 321 aa14.55□□□□□ -0.08
PCNX1-209ENST00000554879 MED19A0JLT2 244 aaPredicted RBP14.54□□□□□ -0.08
PCNX1-209ENST00000554879 HSPB2A8KAH6 182 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 PIN1P1O15428 100 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 CNOT4O95628 575 aaKnown RBP14.54□□□□□ -0.08
PCNX1-209ENST00000554879 HSPB2Q16082 182 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 PEG10Q86TG7 708 aaKnown RBP14.54□□□□□ -0.08
PCNX1-209ENST00000554879 BPIFB2Q8N4F0 458 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 SUMF1Q8NBK3 374 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 GPR61Q9BZJ8 451 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 POFUT1Q9H488 388 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 RHBDD3Q9Y3P4 386 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 UMAD1C9J7I0 102 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 TAS2R20P59543 309 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 HIST2H3PS2Q5TEC6 136 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 FAM219AQ8IW50 185 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 RNF133Q8WVZ7 376 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 FGF11Q92914 225 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 ZNF71Q9NQZ8 489 aaPredicted RBP14.54□□□□□ -0.08
PCNX1-209ENST00000554879 LMX1BO60663 402 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 WNT11O96014 354 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 RNASE10Q5GAN6 216 aaKnown RBP14.54□□□□□ -0.08
PCNX1-209ENST00000554879 ACOT7LQ6ZUV0 252 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 BAP18Q8IXM2 172 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 C15orf54Q8N8G6 183 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 OR8B12Q8NGG6 310 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 OR6K3Q8NGY3 331 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 ST6GALNAC5Q9BVH7 336 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 FLVCR1Q9Y5Y0 555 aa14.54□□□□□ -0.08
PCNX1-209ENST00000554879 PRRC2CQ9Y520 2896 aaKnown RBP14.53□□□□□ -0.08
PCNX1-209ENST00000554879 NME2P1O60361 137 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 RAD51DO75771 328 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 AWAT1Q58HT5 328 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 TSPO2Q5TGU0 170 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 DEGS2Q6QHC5 323 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 EDARADDQ8WWZ3 215 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 TMEM59Q9BXS4 323 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 B3GAT1Q9P2W7 334 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 RBM7Q9Y580 266 aaKnown RBP14.53□□□□□ -0.08
PCNX1-209ENST00000554879 J3QRE1 110 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 UBE2KP61086 200 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 CATSPERDQ86XM0 798 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 ASB5Q8WWX0 329 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 C7orf77A4D0Y5 90 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 CYB5BO43169 146 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 IGHV2-70P01814 119 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 SOHLH1Q5JUK2 328 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 ADGRE4PQ86SQ3 457 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 SUMF2Q8NBJ7 301 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 CEP295Q9C0D2 2601 aa14.53□□□□□ -0.08
PCNX1-209ENST00000554879 BCL2L11O43521 198 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 CD82P27701 267 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 TAGLN2P37802 199 aaKnown RBP14.52□□□□□ -0.08
PCNX1-209ENST00000554879 RELQ04864 619 aaPredicted RBP14.52□□□□□ -0.08
PCNX1-209ENST00000554879 CLN3Q13286 438 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 SMIM4Q8WVI0 70 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 LRFN3Q9BTN0 628 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 ETV7Q9Y603 341 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 LHFPL6Q9Y693 200 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 MMP15P51511 669 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 PJVKQ0ZLH3 352 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 ZNF485Q8NCK3 441 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 OR52N4Q8NGI2 321 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 OR1F12Q8NHA8 337 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 SARAFQ96BY9 339 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 OCSTAMPQ9BR26 566 aa14.52□□□□□ -0.08
PCNX1-209ENST00000554879 HMSDA8MTL9 139 aa14.52□□□□□ -0.09
PCNX1-209ENST00000554879 AQP7O14520 342 aa14.52□□□□□ -0.09
PCNX1-209ENST00000554879 ACTBP60709 375 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms