RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PRORYQ9H606 182 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 ASB7Q9H672 318 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 TREM1Q9NP99 234 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 DAZ1Q9NQZ3 744 aaKnown RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 RBM12B-AS1Q9P1G2 102 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 DHCR7Q9UBM7 475 aaKnown RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 INSIG2Q9Y5U4 225 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 NPHP4O75161 1426 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-213ENST00000554776 SVILO95425 2214 aa1.71□□□□□ -2.14
SCFD1-213ENST00000554776 KIAA1671Q9BY89 1806 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 RPRD2Q5VT52 1461 aaKnown RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 RBFOX3A6NFN3 312 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 OR7C2O60412 319 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 OR2A4O95047 310 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 CST4P01036 141 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 NRASP01111 189 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 HRASP01112 189 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 KRASP01116 189 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 CDK1P06493 297 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 OR4Q2P0C623 313 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 DNASE1L1P49184 302 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 TUFMP49411 452 aaKnown RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 ERFP50548 548 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 XKP51811 444 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 ATP5G2Q06055 141 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 TMED1Q13445 227 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 ELOCQ15369 112 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 CEACAM16Q2WEN9 425 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 KRTAP13-2Q52LG2 175 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 KPRPQ5T749 579 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 KCTD16Q68DU8 428 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 AHSA2Q719I0 299 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 DRAXINQ8NBI3 349 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 ITLN2Q8WWU7 325 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 OR2A7Q96R45 310 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF649Q9BS31 505 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 POMKQ9H5K3 350 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 PARP11Q9NR21 331 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 TMEM38BQ9NVV0 291 aa1.7□□□□□ -2.14
SCFD1-213ENST00000554776 RBM22Q9NW64 420 aaKnown RBP eCLIP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 STX18Q9P2W9 335 aaKnown RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 MARCOQ9UEW3 520 aaPredicted RBP1.7□□□□□ -2.14
SCFD1-213ENST00000554776 LOC389332A0A1B0GUA5 103 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 H3BP45 60 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 K7ERQ8 282 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 SHOX2O60902 331 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 CXorf1O96002 111 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 NPPAP01160 153 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 CELP19835 753 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 DSTNP60981 165 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 VSNL1P62760 191 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 MEF2CQ06413 473 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 TPBGQ13641 420 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 FAM53BQ14153 422 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 TRAM1Q15629 374 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 TOMM34Q15785 309 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 TMEM241Q24JQ0 296 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 IDNKQ5T6J7 187 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF773Q6PK81 442 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 UGT2A3Q6UWM9 527 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 Q6ZT83 130 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 FAM231DQ6ZW35 169 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 SSX6Q7RTT6 188 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 LINC00596Q86U02 117 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 SGPP2Q8IWX5 399 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 SELENOHQ8IZQ5 122 aaKnown RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 ZDHHC22Q8N966 263 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 OR52N1Q8NH53 320 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 RILPQ96NA2 401 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF436Q9C0F3 470 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 SRRQ9GZT4 340 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 NXF2Q9GZY0 626 aaKnown RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 GOLPH3Q9H4A6 298 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 OR2S2Q9NQN1 319 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 SDHAF3Q9NRP4 125 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 NLE1Q9NVX2 485 aaPredicted RBP1.69□□□□□ -2.14
SCFD1-213ENST00000554776 ZNF780BQ9Y6R6 833 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 MIA3Q5JRA6 1907 aa1.69□□□□□ -2.14
SCFD1-213ENST00000554776 IGHV3OR16-8A0A075B7F1 116 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 OR2AT4A6NND4 320 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 UPK1AO00322 258 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 TCAPO15273 167 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 YKT6O15498 198 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 BRI3O95415 125 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 LDOC1O95751 146 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-213ENST00000554776 CD5P06127 495 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 OR5AC1P0C628 307 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 MPV17P39210 176 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 MAGEA6P43360 314 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 SLC18A1P54219 525 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 AQP5P55064 265 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 CCL23P55773 120 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 OR2B6P58173 313 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 XRCC4Q13426 336 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 SSX1Q16384 188 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 HBMQ6B0K9 141 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 CASP12Q6UXS9 341 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 FA2HQ7L5A8 372 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 COPS6Q7L5N1 327 aa1.68□□□□□ -2.14
SCFD1-213ENST00000554776 RNF10Q8N5U6 811 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms