RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 UBCP0CG48 685 aaKnown RBP10.84□□□□□ -0.67
SHMT2-211ENST00000554310 CELP19835 753 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 ACTA2P62736 377 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 ACTG2P63267 376 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 RGS21Q2M5E4 152 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 C22orf42Q6IC83 251 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 SYS1Q8N2H4 156 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 ZFP41Q8N8Y5 198 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 PNLDC1Q8NA58 520 aaKnown RBP10.84□□□□□ -0.67
SHMT2-211ENST00000554310 CCDC54Q8NEL0 328 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 OR14K1Q8NGZ2 314 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 TMEM203Q969S6 136 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
SHMT2-211ENST00000554310 BARHL1Q9BZE3 327 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 ISG20L2Q9H9L3 353 aaKnown RBP10.84□□□□□ -0.67
SHMT2-211ENST00000554310 PLEKHA1Q9HB21 404 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 SLC22A13Q9Y226 551 aa10.84□□□□□ -0.67
SHMT2-211ENST00000554310 TRAV40A0A0B4J280 105 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 GABRPO00591 440 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 GPR37O15354 613 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 AKR7A2O43488 359 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 SYT7O43581 403 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 RGS9O75916 674 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-211ENST00000554310 FGF12P61328 243 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 TUSC1Q2TAM9 212 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 TP53I3Q53FA7 332 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 ATPAF1Q5TC12 328 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-211ENST00000554310 RBMS3Q6XE24 437 aaKnown RBP10.83□□□□□ -0.68
SHMT2-211ENST00000554310 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 MOB3CQ70IA8 216 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 KCTD20Q7Z5Y7 419 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 CCDC190Q86UF4 302 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 FAM216BQ8N7L0 139 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 MINDY2Q8NBR6 621 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF671Q8TAW3 534 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 ST8SIA4Q92187 359 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 AQP3Q92482 292 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 WDFY2Q96P53 400 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 CCL13Q99616 98 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 WDR13Q9H1Z4 485 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 SNTG1Q9NSN8 517 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF69Q9UC07 566 aa10.83□□□□□ -0.68
SHMT2-211ENST00000554310 LOC107986453A0A1B0GWG9 222 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 PQLC2LA1A4F0 135 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 ANKRD61A6NGH8 418 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF879B4DU55 563 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 TRIM77I1YAP6 450 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 J3QT63 122 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 NDUFB3O43676 98 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 RHBDL1O75783 438 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 PLATP00750 562 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 CD1AP06126 327 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 IGHV4-38-2P0DP08 117 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 GLRA1P23415 457 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 GMFBP60983 142 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 ODF4Q2M2E3 257 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 SMIM21Q3B7S5 101 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 LRRC10Q5BKY1 277 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 HAGHLQ6PII5 290 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-211ENST00000554310 BTN2A1Q7KYR7 527 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 ZNF573Q86YE8 665 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 PRSS35Q8N3Z0 413 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 C22orf15Q8WYQ4 148 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 AP3S1Q92572 193 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 C10orf35Q96D05 121 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 SEH1LQ96EE3 360 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 C4orf36Q96KX1 117 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 DMRTB1Q96MA1 342 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 TMED9Q9BVK6 235 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 GPR173Q9NS66 373 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 NLKQ9UBE8 527 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 POLDIP2Q9Y2S7 368 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 ANK2Q01484 3957 aa10.82□□□□□ -0.68
SHMT2-211ENST00000554310 A0A1B0GW55 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 OR2AT4A6NND4 320 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 OGG1O15527 345 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 FCN3O75636 299 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 UPK1BO75841 260 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 GATBO75879 557 aaKnown RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L2P0CJ85 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L3P0CJ86 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L4P0CJ87 422 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L5P0CJ88 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L6P0CJ89 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L7P0CJ90 424 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 AMY2BP19961 511 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 SDC2P34741 201 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 KIR3DL2P43630 455 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 HAAOP46952 286 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 TGM4P49221 684 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 IL13RA1P78552 427 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 IFITM3Q01628 133 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 GPR157Q5UAW9 335 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 METTL11BQ5VVY1 283 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-211ENST00000554310 FDX2Q6P4F2 183 aa10.81□□□□□ -0.68
SHMT2-211ENST00000554310 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms