RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 AMBPP02760 352 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TRGC1P0CF51 173 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 HOXB2P14652 356 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 CNR2P34972 360 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 MMP15P51511 669 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PLP1P60201 277 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ERVPABLB-1P60509 514 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PFN3P60673 137 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 FAM3AP98173 230 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 BAXQ07812 192 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 BCL2L1Q07817 233 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 MESP2Q0VG99 397 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 MMDQ15546 238 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 FNDC7Q5VTL7 733 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ACSM6Q6P461 480 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 IL34Q6ZMJ4 242 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMPRSS11BQ86T26 416 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 LINC01551Q86U37 167 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 YRDCQ86U90 279 aaKnown RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 NIT1Q86X76 327 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 B3GNT7Q8NFL0 401 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR51D1Q8NGF3 324 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 OR51L1Q8NGJ5 315 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ADAMTS17Q8TE56 1095 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TWIST2Q8WVJ9 160 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 DVL3Q92997 716 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 TMEM18Q96B42 140 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 RAB39BQ96DA2 213 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TBX15Q96SF7 602 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 MACROD1Q9BQ69 325 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ACTR3CQ9C0K3 210 aaPredicted RBP3.54□□□□□ -1.84
RDH11-204ENST00000553578 TUBA4BQ9H853 241 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 MED20Q9H944 212 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 RLIMQ9NVW2 624 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 ZNF586Q9NXT0 402 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 FKBP11Q9NYL4 201 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TAS2R8Q9NYW2 309 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PILRBQ9UKJ0 227 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 PSG11Q9UQ72 335 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 TNFRSF18Q9Y5U5 241 aa3.54□□□□□ -1.84
RDH11-204ENST00000553578 DOCK8Q8NF50 2099 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 MYO10Q9HD67 2058 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 HIDE1A8MVS5 230 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 CORTO00230 105 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 GALR3O60755 368 aaPredicted RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 OR2F2O95006 317 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ADH4P08319 380 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 PRSS56P0CW18 603 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ATP1B2P14415 290 aaPredicted RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 CD22P20273 847 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 SLC6A11P48066 632 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 DAPP51397 102 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 BLKP51451 505 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 FOXA1P55317 472 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ZFP36L1Q07352 338 aaKnown RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 ST3GAL3Q11203 375 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ABRAXAS2Q15018 415 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 C1orf194Q5T5A4 169 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 DCAF12Q5T6F0 453 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 TXNDC8Q6A555 127 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 UNQ9370/PRO34162Q6UXP9 181 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 MEX3DQ86XN8 651 aaKnown RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 MARCH9Q86YJ5 346 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 C1QL4Q86Z23 238 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 MFSD8Q8NHS3 518 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 PIGXQ8TBF5 258 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 TMEM239Q8WW34 195 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 TSLPQ969D9 159 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 MALSU1Q96EH3 234 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 TMEM27Q9HBJ8 222 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 IL36AQ9UHA7 158 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 NPTNQ9Y639 398 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 PRSS21Q9Y6M0 314 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ENPP4Q9Y6X5 453 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 TGIF2-C20orf24A0A0A6YYL0 155 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 FAM220BPB1ANY3 271 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 UMAD1C9J7I0 102 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 OR5AC1P0C628 307 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 TPT1P13693 172 aaKnown RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 GPX2P18283 190 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ELK1P19419 428 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 BCL3P20749 454 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 BMP5P22003 454 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 MMP11P24347 488 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 DUSP1P28562 367 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 MPGP29372 298 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 OPRD1P41143 372 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 SLC6A8P48029 635 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 HINT1P49773 126 aaPredicted RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 CCL23P55773 120 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 RAB38P57729 211 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 RANP62826 216 aaKnown RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 CFHR1Q03591 330 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 OR7A5Q15622 319 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 C6orf136Q5SQH8 315 aa3.53□□□□□ -1.84
RDH11-204ENST00000553578 ZNF770Q6IQ21 691 aaPredicted RBP3.53□□□□□ -1.84
RDH11-204ENST00000553578 TMEM205Q6UW68 189 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms