RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 LCN8Q6JVE9 175 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 RPL13AP3Q6NVV1 102 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 C16orf82Q7Z2V1 217 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 CPLX4Q7Z7G2 160 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 LINC00471Q8N535 108 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR4X2Q8NGF9 303 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR8B12Q8NGG6 310 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR52L1Q8NGH7 329 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR13D1Q8NGV5 346 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR6N2Q8NGY6 317 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR2T27Q8NH04 317 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR4Q3Q8NH05 313 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 PIGCQ92535 297 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF503Q96F45 646 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 PGAM5Q96HS1 289 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF488Q96MN9 340 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 OR8B4Q96RC9 309 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 KCTD14Q9BQ13 255 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-219ENST00000553488 BTBD10Q9BSF8 475 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 HES4Q9HCC6 221 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 GAR1Q9NY12 217 aaKnown RBP5.77□□□□□ -1.49
ATXN3-219ENST00000553488 RASL12Q9NYN1 266 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 IL20Q9NYY1 176 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 SAMD4AQ9UPU9 718 aaKnown RBP5.77□□□□□ -1.49
ATXN3-219ENST00000553488 PCDHGB5Q9Y5G0 923 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 MINOS1-NBL1R4GNA1 71 aa5.77□□□□□ -1.49
ATXN3-219ENST00000553488 IGHV2-26A0A0B4J1V2 119 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 LCE6AA0A183 80 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 MEX3AA1L020 520 aaKnown RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 SH2D7A6NKC9 451 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 OR5B21A6NL26 309 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 SLC1A7O00341 560 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 SLC22A2O15244 555 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 NOS1APO75052 506 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF737O75373 536 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 IGLV3-1P01715 115 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 TK1P04183 234 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 LPLP06858 475 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF728P0DKX0 622 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 PIPP12273 146 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 LMO1P25800 156 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 RRM2P31350 389 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 PRDX2P32119 198 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 SMIM11AP58511 58 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 RPL23AP62750 156 aaKnown RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 DGCR2P98153 550 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 SLC34A1Q06495 639 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 KRT72Q14CN4 511 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 CEACAM21Q3KPI0 293 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 DMRTC1Q5HYR2 192 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 KHDC1LQ5JSQ8 128 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 HAGHLQ6PII5 290 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 HACD2Q6Y1H2 254 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 C18orf65Q6ZTR6 163 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 TRPM8Q7Z2W7 1104 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 CENPVQ7Z7K6 275 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 ERI1Q8IV48 349 aaKnown RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 TIGD4Q8IY51 512 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 OSR2Q8N2R0 312 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 OR9Q2Q8NGE9 314 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 OR4P4Q8NGL7 312 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 OR6K6Q8NGW6 343 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 RP9Q8TA86 221 aaKnown RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 MUC7Q8TAX7 377 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 GNPDA2Q8TDQ7 276 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 INTS14Q96SY0 518 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 P2RX4Q99571 388 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 HOPXQ9BPY8 73 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 NRIP2Q9BQI9 281 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 MCRIP2Q9BUT9 160 aaKnown RBP5.76□□□□□ -1.49
ATXN3-219ENST00000553488 CHID1Q9BWS9 393 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 TBC1D23Q9NUY8 699 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 HILPDAQ9Y5L2 63 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 V9GYQ6 96 aa5.76□□□□□ -1.49
ATXN3-219ENST00000553488 J3QT63 122 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 K7N7A8 449 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 OR2F2O95006 317 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ZFPL1O95159 310 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 COX4I1P13073 169 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 MPZP25189 248 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 IFNGR2P38484 337 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 BLVRAP53004 296 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 OR12D2P58182 307 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ACTA2P62736 377 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ACTG2P63267 376 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ACTC1P68032 377 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ACTA1P68133 377 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 SF3A3Q12874 501 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATXN3-219ENST00000553488 FOXE3Q13461 319 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ABCA11PQ4W5N1 156 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 KLHL22Q53GT1 634 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 GLYATQ6IB77 296 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 RASSF6Q6ZTQ3 369 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 OR2W3Q7Z3T1 314 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 OR51D1Q8NGF3 324 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 OR5A2Q8NGI9 324 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 IL17DQ8TAD2 202 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF671Q8TAW3 534 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ZNF714Q96N38 554 aa5.75□□□□□ -1.49
ATXN3-219ENST00000553488 ELAC2Q9BQ52 826 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms