RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 OR8B12Q8NGG6 310 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 RNF2Q99496 336 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 MAP1LC3BQ9GZQ8 125 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 TOLLIPQ9H0E2 274 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 MRPS18AQ9NVS2 196 aaKnown RBP10.23□□□□□ -0.77
SYNE2-208ENST00000553289 AMMECR1Q9Y4X0 333 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-208ENST00000553289 J3QR89 54 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 K7EQS6 105 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM108Q6UXF1 575 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM147Q9BVK8 224 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
SYNE2-208ENST00000553289 AMDHD2Q9Y303 409 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 V9GYH0 126 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 A0A1W2PN81 502 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 OR5H15A6NDH6 313 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 DNPH1O43598 174 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 FCGR3BO75015 233 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 HSBP1O75506 76 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 CHRNA7P36544 502 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 P2RY1P47900 373 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 RHOBP62745 196 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 FAM3AP98173 230 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM211Q6ICI0 200 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 OR5M9Q8NGP3 310 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 BCL2L2Q92843 193 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-208ENST00000553289 HES7Q9BYE0 225 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 CYR61O00622 381 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 PLAC9Q5JTB6 97 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 PRR27Q6MZM9 219 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 FBXO17Q96EF6 278 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 CA10Q9NS85 328 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 KIAA0100Q14667 2235 aaKnown RBP10.22□□□□□ -0.77
SYNE2-208ENST00000553289 SLC31A2O15432 143 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 OR5AC1P0C628 307 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-208ENST00000553289 DMRTC1Q5HYR2 192 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 B3GNTL1Q67FW5 361 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-208ENST00000553289 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 ANXA10Q9UJ72 324 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 PSG11Q9UQ72 335 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 ARL2-SNX15V9GYD0 113 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 ACTL6AO96019 429 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM267Q0VDI3 215 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-208ENST00000553289 PNRC1Q12796 327 aaPredicted RBP10.22□□□□□ -0.77
SYNE2-208ENST00000553289 LIAT1Q6ZQX7 453 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 NXF2Q9GZY0 626 aaKnown RBP10.22□□□□□ -0.77
SYNE2-208ENST00000553289 LHX9Q9NQ69 397 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 CACNG5Q9UF02 275 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 STARD10Q9Y365 291 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 TRAPPC1Q9Y5R8 145 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 A0A1B0GTH9 108 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 OR5H1A6NKK0 313 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 SEMG1P04279 462 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 CD1AP06126 327 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 GABRA1P14867 456 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 PAX5Q02548 391 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 OR1L4Q8NGR5 311 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 RASL10BQ96S79 203 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 LRFN3Q9BTN0 628 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 FRRS1LQ9P0K9 344 aa10.22□□□□□ -0.77
SYNE2-208ENST00000553289 SCN1AP35498 2009 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 LYG1Q8N1E2 194 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 LRRC29Q8WV35 223 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 RPEQ96AT9 228 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 TM4SF19Q96DZ7 209 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 FBXL17Q9UF56 701 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 CES1P1Q9UKY3 287 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 TRDCB7Z8K6 153 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 H3BMH7 237 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 SCO1O75880 301 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 WISP3O95389 354 aaPredicted RBP10.21□□□□□ -0.77
SYNE2-208ENST00000553289 ANKRD34CP0C6C1 535 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 PRRX1P54821 245 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 SKP2Q13309 424 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 CD226Q15762 336 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 SLC52A3Q9NQ40 469 aa10.21□□□□□ -0.77
SYNE2-208ENST00000553289 A0A1W2PPV9 198 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 MMP7P09237 267 aaPredicted RBP10.21□□□□□ -0.78
SYNE2-208ENST00000553289 CDC34P49427 236 aaPredicted RBP10.21□□□□□ -0.78
SYNE2-208ENST00000553289 ZNF83P51522 516 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 FOXO1Q12778 655 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 Q3ZCU0 254 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 ETV3LQ6ZN32 361 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 STPG2Q8N412 459 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 OR4D11Q8NGI4 311 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 OR2D2Q9H210 308 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 SEBOXQ9HB31 216 aaPredicted RBP10.21□□□□□ -0.78
SYNE2-208ENST00000553289 CNTRLQ7Z7A1 2325 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 OR2M5A3KFT3 312 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 OR4C45A6NMZ5 311 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 IQCJQ1A5X6 159 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 HFEQ30201 348 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 ALKBH6Q3KRA9 238 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 COL13A1Q5TAT6 717 aaPredicted RBP10.21□□□□□ -0.78
SYNE2-208ENST00000553289 OR4S2Q8NH73 311 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 ST6GAL2Q96JF0 529 aa10.21□□□□□ -0.78
SYNE2-208ENST00000553289 CELA2BP08218 269 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms