RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KIAA0232Q92628 1395 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 A0A1B0GX12 115 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 A8MWL6 223 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 M0QXV9 152 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SULT1C2O00338 296 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 UBDO15205 165 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 MAGEB4O15481 346 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-209ENST00000553280 DHRS3O75911 302 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 CDK14O94921 469 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 CDK1P06493 297 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SYT1P21579 422 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 NPY1RP25929 384 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 KDELR2P33947 212 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 GCLMP48507 274 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 TTPAP49638 278 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 AQP5P55064 265 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 BAXQ07812 192 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 CEACAM21Q3KPI0 293 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 ABCA11PQ4W5N1 156 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 ATP6AP1LQ52LC2 224 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 CLLU1OSQ5K130 101 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SHISA6Q6ZSJ9 500 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 FAM231DQ6ZW35 169 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SSX7Q7RTT5 188 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 ZNF101Q8IZC7 436 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SLC35G3Q8N808 338 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 PHF10Q8WUB8 498 aaKnown RBP3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SPIN2AQ99865 258 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SPIN2BQ9BPZ2 258 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 LHX5Q9H2C1 402 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 SDHAF3Q9NRP4 125 aa3.03□□□□□ -1.92
SCFD1-209ENST00000553280 RBM22Q9NW64 420 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCFD1-209ENST00000553280 PRRC2AP48634 2157 aaKnown RBP3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ELP1O95163 1332 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ABCB11O95342 1321 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 IGLV4-60A0A075B6I1 120 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 LOC389332A0A1B0GUA5 103 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 A0A1B0GXF2 115 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF850A8MQ14 1090 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 TOR1AO14656 332 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 CALUO43852 315 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-209ENST00000553280 MYO1DO94832 1006 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 PSMB6P28072 239 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 OR10A3P58181 314 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ELF3P78545 371 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-209ENST00000553280 PITPNAQ00169 270 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 EIF4EBP1Q13541 118 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF404Q494X3 552 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 PRNTQ86SH4 94 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 OR2Z1Q8NG97 314 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 FAM57AQ8TBR7 257 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 C22orf15Q8WYQ4 148 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 BIRC8Q96P09 236 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 HBEGFQ99075 208 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 PITX2Q99697 317 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 TSGA10Q9BZW7 698 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 DSN1Q9H410 356 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ZSCAN16Q9H4T2 348 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-209ENST00000553280 ASB7Q9H672 318 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 FBXO6Q9NRD1 293 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-209ENST00000553280 INSIG2Q9Y5U4 225 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 PLA2R1Q13018 1463 aa3.02□□□□□ -1.93
SCFD1-209ENST00000553280 NRCAMQ92823 1304 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 TMEM213A2RRL7 107 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 RBFOX3A6NFN3 312 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 SMLR1H3BR10 107 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 IGKV5-2P06315 115 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 RAB31Q13636 194 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 TMEM249Q2WGJ8 235 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 KRTAP13-3Q3SY46 172 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 Q499Y3 187 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 COX19Q49B96 90 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 OR10J3Q5JRS4 329 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 RBM48Q5RL73 367 aaKnown RBP3.01□□□□□ -1.93
SCFD1-209ENST00000553280 UNQ9165/PRO28630Q6UXU0 137 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 CRLF3Q8IUI8 442 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 OR52N1Q8NH53 320 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF420Q8TAQ5 688 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-209ENST00000553280 GPR82Q96P67 336 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF251Q9BRH9 671 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 MARVELD1Q9BSK0 173 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 ANGPTL4Q9BY76 406 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 API5Q9BZZ5 524 aaKnown RBP3.01□□□□□ -1.93
SCFD1-209ENST00000553280 SRRQ9GZT4 340 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 EURLQ9NYK6 297 aa3.01□□□□□ -1.93
SCFD1-209ENST00000553280 NOSIPQ9Y314 301 aaKnown RBP3.01□□□□□ -1.93
SCFD1-209ENST00000553280 SLIT3O75094 1523 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 F8VZ95 297 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 FABP7O15540 132 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 SNAP29O95721 258 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 SNRPAP09012 282 aaKnown RBP3□□□□□ -1.93
SCFD1-209ENST00000553280 LGALS7P47929 136 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF616Q08AN1 781 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 BNIP2Q12982 314 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 SP6Q3SY56 376 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 KLHL12Q53G59 568 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 ACTBL2Q562R1 376 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 ZNF880Q6PDB4 577 aa3□□□□□ -1.93
SCFD1-209ENST00000553280 PDPNQ86YL7 162 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms