RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 OR8G1Q15617 311 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 NKAPLQ5M9Q1 402 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 OR51S1Q8NGJ8 323 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 IFT46Q9NQC8 304 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 KALRNO60229 2985 aa16.65■□□□□ 0.26
RBFOX1-215ENST00000553186 NBASA2RRP1 2371 aa16.64■□□□□ 0.26
RBFOX1-215ENST00000553186 HEATR1Q9H583 2144 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 NDUFB6O95139 128 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 ZNF735P0CB33 412 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 ZNF782Q6ZMW2 699 aaPredicted RBP16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 SCCPDHQ8NBX0 429 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 TMEM171Q8WVE6 324 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 FLVCR2Q9UPI3 526 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 H2AFB2P0C5Z0 115 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 PDCD1Q15116 288 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 SSX8Q7RTT4 187 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 LRP11Q86VZ4 500 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 EMG1Q92979 244 aaKnown RBP16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 ZNF488Q96MN9 340 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 SULT4A1Q9BR01 284 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 FAAP24Q9BTP7 215 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 NKIRAS2Q9NYR9 191 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 IL36RNQ9UBH0 155 aa16.64■□□□□ 0.25
RBFOX1-215ENST00000553186 MSL2Q9HCI7 577 aa16.63■□□□□ 0.25
RBFOX1-215ENST00000553186 NPDC1Q9NQX5 325 aaPredicted RBP16.63■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A10PA6NDY2 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A18PA6NE21 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A16PA6NEW6 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A20PA6NIJ5 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A8PA6NJQ4 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A7PA6NKC0 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 TMEM210A6NLX4 147 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A22PA8MWA6 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A12PA8MX19 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A5PA8MXJ8 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A23PA8MXZ1 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 IGHV3-13P01766 116 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A15PP0C7V4 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A13PP0C7W8 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A14PP0C7W9 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FAM90A24PP0C7X0 464 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 CBX5P45973 191 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 ASCL1P50553 236 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 TMEM108Q6UXF1 575 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 WFDC8Q8IUA0 241 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 ZBTB8BQ8NAP8 495 aaPredicted RBP16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 DPRXA6NFQ7 191 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 PDCD6O75340 191 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 OR7C1O76099 320 aaPredicted RBP16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 DHFRP00374 187 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 PTAFRP25105 342 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 CHRNB4P30926 498 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 ADORA2A-AS1P86434 159 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 CBX3Q13185 183 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 MAB21L1Q13394 359 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 RBMS2Q15434 407 aaKnown RBP16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 FBXL19-AS1Q494R0 122 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 BRICD5Q6PL45 260 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 OR13G1Q8NGZ3 307 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 WFIKKN1Q96NZ8 548 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 DUSP13Q9UII6 198 aa16.62■□□□□ 0.25
RBFOX1-215ENST00000553186 IGLV3-9A0A075B6K5 115 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 C7orf66A4D0T2 115 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 PRSS44E7EML9 344 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 CDIPTO14735 213 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 ATXN7O15265 892 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 ATP6V1G1O75348 118 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 AMY2AP04746 511 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 TBPP20226 339 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 FUT3P21217 361 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 HRH1P35367 487 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 RNASE10Q5GAN6 216 aaKnown RBP16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 HOGA1Q86XE5 327 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 HPS1Q92902 700 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 SLC6A7Q99884 636 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 HDHD3Q9BSH5 251 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 ZNF230Q9UIE0 474 aaPredicted RBP16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 AK3Q9UIJ7 227 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 COL6A6A6NMZ7 2263 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 A0A0A6YYJ9 748 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 IGHV3-64DA0A0J9YX35 117 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 C3orf80F5H4A9 247 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 F5H5P2 479 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 PEX14O75381 377 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 PPP3CBP16298 524 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 ERVK11-1P61568 191 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 MEF2DQ14814 521 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 BPIFB2Q8N4F0 458 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 CXXC4Q9H2H0 198 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 GHITMQ9H3K2 345 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 RHOFQ9HBH0 211 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 POLDIP2Q9Y2S7 368 aa16.61■□□□□ 0.25
RBFOX1-215ENST00000553186 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 HMX3A6NHT5 357 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 ARPC1BO15143 372 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 GRPP07492 148 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 SNU13P55769 128 aaKnown RBP16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 ESPL1Q14674 2120 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 MICBQ29980 383 aa16.6■□□□□ 0.25
RBFOX1-215ENST00000553186 VHLLQ6RSH7 139 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms