RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	EMG1	Q92979	244 aa	Known RBP	10.8	□□□□□ -0.68
CACNB3-223	ENST00000552480	PPP1R14B	Q96C90	147 aa		10.8	□□□□□ -0.68
CACNB3-223	ENST00000552480	TLNRD1	Q9H1K6	362 aa		10.8	□□□□□ -0.68
CACNB3-223	ENST00000552480	NUDT15	Q9NV35	164 aa		10.8	□□□□□ -0.68
CACNB3-223	ENST00000552480		F8VVB4	439 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480		F8VWA3	439 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480		H3BUI4	141 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	TPD52L2	O43399	206 aa	Known RBP	10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	RHBDL1	O75783	438 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	FCER2	P06734	321 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	ACAA1	P09110	424 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	H2AFB2	P0C5Z0	115 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	PRKACA	P17612	351 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	FUT3	P21217	361 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	HLA-DMA	P28067	261 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	RAG2	P55895	527 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	BSPH1	Q075Z2	132 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	ZNF154	Q13106	437 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	IL13RA2	Q14627	380 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	MPV17L	Q2QL34	196 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	ACTBL2	Q562R1	376 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	AGAP6	Q5VW22	663 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	LRP11	Q86VZ4	500 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	HOGA1	Q86XE5	327 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAM58A	Q8N1B3	248 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	BATF2	Q8N1L9	274 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	GVQW1	Q8N7I0	195 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	OR4D10	Q8NGI6	311 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	MSL2	Q9HCI7	577 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	ZNF581	Q9P0T4	197 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	DUSP13	Q9UII6	198 aa		10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.79	□□□□□ -0.68
CACNB3-223	ENST00000552480		A0A0B4J293	547 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	NKX2-6	A6NCS4	301 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	DISC1	C4P0D8	188 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480		F5H5P2	479 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480		M0QYG6	137 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	ABCD4	O14678	606 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	NDUFB6	O95139	128 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	DHFR	P00374	187 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	GRP	P07492	148 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	PGA5	P0DJD9	388 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	CD200	P41217	278 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	SELENOV	P59797	346 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	ERVK11-1	P61568	191 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	SORD	Q00796	357 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	DAZAP2	Q15038	168 aa	Predicted RBP	10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	TATDN3	Q17R31	274 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	RNASE10	Q5GAN6	216 aa	Known RBP	10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	VHLL	Q6RSH7	139 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	POC1A	Q8NBT0	407 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	GALNT11	Q8NCW6	608 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	OR4S1	Q8NGB4	309 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	OR56B4	Q8NH76	319 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	SNAPC3	Q92966	411 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	FBXW5	Q969U6	566 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	MRPL24	Q96A35	216 aa	Known RBP	10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	CYYR1	Q96J86	154 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	ZNF488	Q96MN9	340 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	HS3ST6	Q96QI5	342 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	SYT3	Q9BQG1	590 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	SULT4A1	Q9BR01	284 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	FAAP24	Q9BTP7	215 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	MRPL37	Q9BZE1	423 aa	Known RBP	10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	C20orf85	Q9H1P6	137 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	ZNF442	Q9H7R0	627 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	RCC2	Q9P258	522 aa	Known RBP	10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	NDRG3	Q9UGV2	375 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	AK3	Q9UIJ7	227 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	PLEKHA6	Q9Y2H5	1048 aa		10.78	□□□□□ -0.68
CACNB3-223	ENST00000552480	TRAV6	A0A075B6T7	132 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	PLSCR5	A0PG75	271 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	CDIPT	O14735	213 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ATXN7	O15265	892 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	NOS1AP	O75052	506 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR7C1	O76099	320 aa	Predicted RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	AMY2A	P04746	511 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF735	P0CB33	412 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	AMY2B	P19961	511 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	DTYMK	P23919	212 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	SNU13	P55769	128 aa	Known RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	MRPS15	P82914	257 aa	Known RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	MAB21L1	Q13394	359 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZMYND11	Q15326	602 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	RBMS2	Q15434	407 aa	Known RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	C4orf17	Q53FE4	359 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	NCMAP	Q5T1S8	102 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR52W1	Q6IF63	320 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	MYO7B	Q6PIF6	2116 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	SLC22A25	Q6T423	547 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	ZNF554	Q86TJ5	538 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	C11orf53	Q8IXP5	236 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	BPIFB2	Q8N4F0	458 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR51S1	Q8NGJ8	323 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	OR4K15	Q8NH41	348 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	CA5BP1	Q8WTZ4	195 aa		10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	GTF3A	Q92664	365 aa	Known RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	CMSS1	Q9BQ75	279 aa	Known RBP	10.77	□□□□□ -0.69
CACNB3-223	ENST00000552480	NRIP2	Q9BQI9	281 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms