RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 SLC6A1P30531 599 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 CDC42P60953 191 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 SLC35A2P78381 396 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 SLC7A9P82251 487 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 SNRNP35Q16560 246 aaKnown RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 MICAQ29983 383 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 TTC32Q5I0X7 151 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 FAM78BQ5VT40 261 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 SLC18B1Q6NT16 456 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 EIF4E3Q8N5X7 224 aaKnown RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 METTL27Q8N6F8 245 aaPredicted RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 NPWQ8N729 165 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 BEST4Q8NFU0 473 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 MFSD8Q8NHS3 518 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 MCFD2Q8NI22 146 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 FLVCR1-AS1Q8TAF5 88 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 SRSF12Q8WXF0 261 aaKnown RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 TMBIM1Q969X1 311 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 TBX5Q99593 518 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 EMC6Q9BV81 110 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 TMEM100Q9NV29 134 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 TAS2R5Q9NYW4 299 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 CARHSP1Q9Y2V2 147 aaKnown RBP4.95□□□□□ -1.62
VPS29-210ENST00000552130 ORC6Q9Y5N6 252 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 NCOA1Q15788 1441 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 RLFQ13129 1914 aa4.95□□□□□ -1.62
VPS29-210ENST00000552130 A0A0U1RQV1 116 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 PRORSD1PA6NEY8 169 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 BTNL10A8MVZ5 291 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 HCRTR1O43613 425 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GPR75O95800 540 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 CRYGDP07320 174 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 CYBAP13498 195 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GABRA1P14867 456 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GZMHP20718 246 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 VDAC1P21796 283 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 SPRP35270 261 aaPredicted RBP4.94□□□□□ -1.62
VPS29-210ENST00000552130 GGT2P36268 569 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GZMMP51124 257 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 CACNG7P62955 275 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 HBG1P69891 147 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 HBG2P69892 147 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 QPRTQ15274 297 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 CCL14Q16627 93 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 ACOT6Q3I5F7 207 aaPredicted RBP4.94□□□□□ -1.62
VPS29-210ENST00000552130 ZNF585BQ52M93 769 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 AVPI1Q5T686 147 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 ANKRD22Q5VYY1 191 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 RPL13AP3Q6NVV1 102 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 UGT2A3Q6UWM9 527 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GRINAQ7Z429 371 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GRPEL2Q8TAA5 225 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 SKA2Q8WVK7 121 aaPredicted RBP4.94□□□□□ -1.62
VPS29-210ENST00000552130 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.94□□□□□ -1.62
VPS29-210ENST00000552130 DCUN1D1Q96GG9 259 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 GINS3Q9BRX5 216 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 SLIRPQ9GZT3 109 aaKnown RBP4.94□□□□□ -1.62
VPS29-210ENST00000552130 OR51E2Q9H255 320 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 SPNS1Q9H2V7 528 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 DMAC2Q9NW81 257 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 IDI2-AS1Q9NZ38 188 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 TAAR2Q9P1P5 351 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 XCL2Q9UBD3 114 aa4.94□□□□□ -1.62
VPS29-210ENST00000552130 IGHV4-4A0A075B6R2 117 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 IGHV3OR16-13A0A075B7E8 117 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 EXOC1LA0A1B0GW35 172 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 IGSF23A1L1A6 192 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 F8W036 122 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 H7C417 338 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 XKRYO14609 159 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 PDE6DO43924 150 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 GALR3O60755 368 aaPredicted RBP4.93□□□□□ -1.62
VPS29-210ENST00000552130 NPIPB7O75200 414 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 STK16O75716 305 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 REG1AP05451 166 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 CCR6P51684 374 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 SRPXP78539 464 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 KIAA1644Q3SXP7 199 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 TMEM255AQ5JRV8 349 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 RUSC1-AS1Q66K80 236 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 STEAP4Q687X5 459 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 ZFP1Q6P2D0 407 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 YTHDF3Q7Z739 585 aaKnown RBP4.93□□□□□ -1.62
VPS29-210ENST00000552130 CALHM3Q86XJ0 350 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 CDC20BQ86Y33 519 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 ZNF485Q8NCK3 441 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 LRRC29Q8WV35 223 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 SECTM1Q8WVN6 248 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 OR2M4Q96R27 311 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 RTBDNQ9BSG5 229 aaPredicted RBP4.93□□□□□ -1.62
VPS29-210ENST00000552130 SUCNR1Q9BXA5 334 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 ISG20L2Q9H9L3 353 aaKnown RBP4.93□□□□□ -1.62
VPS29-210ENST00000552130 SPANXA1Q9NS26 97 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 MTFP1Q9UDX5 166 aa4.93□□□□□ -1.62
VPS29-210ENST00000552130 FGF17O60258 216 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 C6orf47O95873 294 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 ALPLP05186 524 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 GKN3PP0CG01 181 aa4.92□□□□□ -1.62
VPS29-210ENST00000552130 ERGP11308 486 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms