RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 RPLP1P05386 114 aaKnown RBP9.34□□□□□ -0.91
PTCH1-222ENST00000551425 MAP2K3P46734 347 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 GSSP48637 474 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 BLVRAP53004 296 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 LIPEQ05469 1076 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 SPATS1Q496A3 300 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 SAMD4BQ5PRF9 694 aaKnown RBP9.34□□□□□ -0.91
PTCH1-222ENST00000551425 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 THNSL2Q86YJ6 484 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 OR8H2Q8N162 312 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 ARHGAP24Q8N264 748 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 STPG2Q8N412 459 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 DRAM1Q8N682 238 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 C5orf56Q8N8D9 126 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 SLC37A3Q8NCC5 494 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 OR52J3Q8NH60 311 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 BTBD10Q9BSF8 475 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 NMNAT2Q9BZQ4 307 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 TAS2R1Q9NYW7 299 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 LINC00527Q9UJ94 153 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 POLDIP2Q9Y2S7 368 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 OOSP1A8MZH6 123 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 J3QT63 122 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 NME4O00746 187 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 MMP23AO75900 390 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 H2BFMP0C1H6 154 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 FAM106CPP0CH98 169 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 MYF6P23409 242 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 CEACAM3P40198 252 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 MNDAP41218 407 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 HAAOP46952 286 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 ERVK11-1P61568 191 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 PLECQ15149 4684 aaKnown RBP9.33□□□□□ -0.92
PTCH1-222ENST00000551425 LCN1P1Q5VSP4 162 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 CCDC144NLQ6NUI1 221 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 ZNF573Q86YE8 665 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 FOXRED2Q8IWF2 684 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 RNF152Q8N8N0 203 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 FAM81AQ8TBF8 368 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 CREB3L1Q96BA8 519 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 SLC7A6OSQ96CW6 309 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-222ENST00000551425 RBMXL1Q96E39 390 aaKnown RBP9.33□□□□□ -0.92
PTCH1-222ENST00000551425 RNFT2Q96EX2 444 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 C7orf34Q96L11 122 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 AMELYQ99218 206 aa9.33□□□□□ -0.92
PTCH1-222ENST00000551425 KCTD14Q9BQ13 255 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-222ENST00000551425 GMPR2Q9P2T1 348 aaKnown RBP9.33□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A18PA6NE21 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 ARRDC5A6NEK1 342 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A16PA6NEW6 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A20PA6NIJ5 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A9PA6NNJ1 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A12PA8MX19 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A5PA8MXJ8 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 GSTA4O15217 222 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FGF16O43320 207 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 GMNNO75496 209 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 GYPBP06028 91 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A15PP0C7V4 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A13PP0C7W8 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A14PP0C7W9 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FAM90A24PP0C7X0 464 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 HSD17B1P14061 328 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 SPI1P17947 270 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FOXE3Q13461 319 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 PNLIPRP3Q17RR3 467 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 CXorf66Q5JRM2 361 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-222ENST00000551425 TPTE2P1Q5T6R2 138 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 LINC01590Q5TEZ4 76 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 PLCXD3Q63HM9 321 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 OR52W1Q6IF63 320 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 MOB3CQ70IA8 216 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 SLC35E3Q7Z769 313 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 OR8B12Q8NGG6 310 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 OR52L1Q8NGH7 329 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 OR6K6Q8NGW6 343 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 C4orf3Q8WVX3 66 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 INTS14Q96SY0 518 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 THTPAQ9BU02 230 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 NIPAL2Q9H841 368 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 DCAF13Q9NV06 445 aaKnown RBP9.32□□□□□ -0.92
PTCH1-222ENST00000551425 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
PTCH1-222ENST00000551425 SORL1Q92673 2214 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 ALMS1Q8TCU4 4167 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 BUB1B-PAK6H3BSN5 160 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 DIRAS1O95057 198 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 CLUP10909 449 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 GP9P14770 177 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 ATP6V1B1P15313 513 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 MPZP25189 248 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 CD34P28906 385 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 SMIM11AP58511 58 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 PSMA6P60900 246 aaKnown RBP9.31□□□□□ -0.92
PTCH1-222ENST00000551425 ESRRGP62508 458 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 TSPAN31Q12999 210 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 CRMP1Q14194 572 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms