RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 SSX6Q7RTT6 188 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 CPLX4Q7Z7G2 160 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 OR5AU1Q8NGC0 362 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 OR52H1Q8NGJ2 320 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 OR2T29Q8NH02 315 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 TEX47Q8TBZ9 253 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 WIPF2Q8TF74 440 aaPredicted RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SLAMF9Q96A28 289 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 C12orf43Q96C57 262 aaKnown RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 SDSLQ96GA7 329 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 TBX5Q99593 518 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 NPFFR1Q9GZQ6 430 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 C1orf21Q9H246 121 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 OPA3Q9H6K4 179 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 REEP1Q9H902 201 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 NECAP2Q9NVZ3 263 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 TAGLN3Q9UI15 199 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 LINC00527Q9UJ94 153 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 LAMP5Q9UJQ1 280 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 IKZF2Q9UKS7 526 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 TCF19Q9Y242 345 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 KIAA2026Q5HYC2 2103 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 DYNC2H1Q8NCM8 4307 aaKnown RBP5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 STAB2Q8WWQ8 2551 aa5.48□□□□□ -1.53
PRPF40B-214ENST00000551320 DNAH7Q8WXX0 4024 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 A0A1B0GTI1 187 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM90A8PA6NJQ4 464 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 TMEM210A6NLX4 147 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 NDUFAB1O14561 156 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 MITFO75030 526 aaPredicted RBP5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 PEX14O75381 377 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 RPP14O95059 124 aaKnown RBP5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 CST1P01037 141 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 NRASP01111 189 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 TTRP02766 147 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 TK1P04183 234 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 LPLP06858 475 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 PGA5P0DJD9 388 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 EPHA2P29317 976 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 PRDX6P30041 224 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 MAGEA2P43356 314 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 VDAC2P45880 294 aaPredicted RBP5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 NPBWR2P48146 333 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 CNN3Q15417 329 aaKnown RBP5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 ABCA11PQ4W5N1 156 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 C9orf152Q5JTZ5 239 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 PRAMEF5Q5TYX0 476 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 RDH10Q8IZV5 341 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 POC1AQ8NBT0 407 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 OR52N4Q8NGI2 321 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 OR5D13Q8NGL4 314 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 GIPC3Q8TF64 312 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 MYDGFQ969H8 173 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 DGCR6LQ9BY27 220 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 CADM1Q9BY67 442 aaKnown RBP5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 FAM234AQ9H0X4 552 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 HEXA-AS1Q9H8Q6 139 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 INPP5EQ9NRR6 644 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 MRGBPQ9NV56 204 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 TVP23BQ9NYZ1 205 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 MTCH1Q9NZJ7 389 aa5.47□□□□□ -1.53
PRPF40B-214ENST00000551320 RYR2Q92736 4967 aa5.46□□□□□ -1.53
PRPF40B-214ENST00000551320 TCRBV4S1A1TA0A5B7 111 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 PQLC2LA1A4F0 135 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 C17orf98A8MV24 154 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ODF3BA8MYP8 253 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 F2RL2O00254 374 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 SLC1A7O00341 560 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 PRKYO43930 277 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 SRSF10O75494 262 aaKnown RBP5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 SNRNP70P08621 437 aaKnown RBP5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 IGHV1-8P0DP01 117 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 CFL1P23528 166 aaKnown RBP5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ACTA2P62736 377 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ACTG2P63267 376 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ACTC1P68032 377 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ACTA1P68133 377 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 CBX1P83916 185 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 RIPPLY1Q0D2K3 151 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 VAX1Q5SQQ9 334 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF684Q5T5D7 378 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 FAM53AQ6NSI3 398 aaPredicted RBP5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 RPL13AP3Q6NVV1 102 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 LCNL1Q6ZST4 164 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF329Q86UD4 541 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 DHFR2Q86XF0 187 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 NDUFA11Q86Y39 141 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ADGRG5Q8IZF4 528 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 OR4S1Q8NGB4 309 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 OR5A2Q8NGI9 324 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 OR5K1Q8NHB7 308 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF671Q8TAW3 534 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 NDNFQ8TB73 568 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 CANT1Q8WVQ1 401 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 LEAP2Q969E1 77 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 RFT1Q96AA3 541 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 NOL4LQ96MY1 436 aaPredicted RBP5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 SPACA5Q96QH8 159 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 ASCL2Q99929 193 aa5.46□□□□□ -1.54
PRPF40B-214ENST00000551320 NRIP2Q9BQI9 281 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms