RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 RPRD1BQ9NQG5 326 aaKnown RBP10.94□□□□□ -0.66
CDX2-202ENST00000548877 A0A1W2PQ09 198 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 FAM90A8PA6NJQ4 464 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 DUS4LO95620 317 aaKnown RBP10.93□□□□□ -0.66
CDX2-202ENST00000548877 ZNF823P16415 610 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 CD36P16671 472 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 BMXP51813 675 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 KRTAP10-11P60412 298 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 LSAMPQ13449 338 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 HABP2Q14520 560 aaPredicted RBP10.93□□□□□ -0.66
CDX2-202ENST00000548877 ZBTB37Q5TC79 503 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 MEPCEQ7L2J0 689 aaKnown RBP10.93□□□□□ -0.66
CDX2-202ENST00000548877 SLC16A9Q7RTY1 509 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 CPOQ8IVL8 374 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 C11orf42Q8N5U0 333 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 OR52I1Q8NGK6 324 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 OR4K13Q8NH42 304 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 LGALS12Q96DT0 336 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 MRPL48Q96GC5 212 aaKnown RBP10.93□□□□□ -0.66
CDX2-202ENST00000548877 RCC1LQ96I51 464 aaKnown RBP10.93□□□□□ -0.66
CDX2-202ENST00000548877 WDR13Q9H1Z4 485 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 ZNF391Q9UJN7 358 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 TCF19Q9Y242 345 aa10.93□□□□□ -0.66
CDX2-202ENST00000548877 EXOGQ9Y2C4 368 aaKnown RBP10.93□□□□□ -0.66
CDX2-202ENST00000548877 A6NDX4 124 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 HLA-DQA2P01906 255 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 CNN3Q15417 329 aaKnown RBP10.92□□□□□ -0.66
CDX2-202ENST00000548877 SPHARQ15513 63 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 MED22Q15528 200 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 DEFB121Q5J5C9 76 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 NANOGP1Q8N7R0 232 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 SGK3Q96BR1 496 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 MGLLQ99685 303 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 PRSS22Q9GZN4 317 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 HEXA-AS1Q9H8Q6 139 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
CDX2-202ENST00000548877 hCG_38984A0A1B0GV85 526 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 TMEM210A6NLX4 147 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 CCRL2O00421 344 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 SLC2A1P11166 492 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 PSKH1P11801 424 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 NDUFB7P17568 137 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 CFL1P23528 166 aaKnown RBP10.91□□□□□ -0.66
CDX2-202ENST00000548877 PAX6P26367 422 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 RPS27P42677 84 aaKnown RBP10.91□□□□□ -0.66
CDX2-202ENST00000548877 SERPINB10P48595 397 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 PRKXP51817 358 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 WNT4P56705 351 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 ACTC1P68032 377 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 ACTA1P68133 377 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 CD69Q07108 199 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 MLLT11Q13015 90 aaPredicted RBP10.91□□□□□ -0.66
CDX2-202ENST00000548877 DYNC1I2Q13409 638 aaKnown RBP10.91□□□□□ -0.66
CDX2-202ENST00000548877 KLHL12Q53G59 568 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 TEX30Q5JUR7 227 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 SLC35D3Q5M8T2 416 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 PLBD1Q6P4A8 553 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 TMPRSS11AQ6ZMR5 421 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 PRSS45Q7RTY3 260 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 MKXQ8IYA7 352 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 CSNK2A3Q8NEV1 391 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 OR52N1Q8NH53 320 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 OTULINQ96BN8 352 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 NKX3-1Q99801 234 aaPredicted RBP10.91□□□□□ -0.66
CDX2-202ENST00000548877 MICU1Q9BPX6 476 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 PPP1R3EQ9H7J1 279 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 SNTG1Q9NSN8 517 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 ZNF222Q9UK12 451 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 MPC1Q9Y5U8 109 aa10.91□□□□□ -0.66
CDX2-202ENST00000548877 DYNC2H1Q8NCM8 4307 aaKnown RBP10.91□□□□□ -0.66
CDX2-202ENST00000548877 OR2AT4A6NND4 320 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 AIREO43918 545 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 GLCEO94923 617 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 IGHA1P01876 353 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 HSMCR30P0CW71 290 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 DCTDP32321 178 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 DYNLT3P51808 116 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 RPS7P62081 194 aaKnown RBP10.9□□□□□ -0.66
CDX2-202ENST00000548877 SLC35F1Q5T1Q4 408 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 SLC16A12Q6ZSM3 486 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 DCXRQ7Z4W1 244 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 ACBD7Q8N6N7 88 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 SLC37A3Q8NCC5 494 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 SDR9C7Q8NEX9 313 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 SLAMF6Q96DU3 332 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 SDSLQ96GA7 329 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 ABCB9Q9NP78 766 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 NLKQ9UBE8 527 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 PITPNC1Q9UKF7 332 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 LSM2Q9Y333 95 aaKnown RBP10.9□□□□□ -0.66
CDX2-202ENST00000548877 RHBDD3Q9Y3P4 386 aa10.9□□□□□ -0.66
CDX2-202ENST00000548877 RYR2Q92736 4967 aa10.89□□□□□ -0.67
CDX2-202ENST00000548877 IGKV1D-17A0A075B6S4 117 aa10.89□□□□□ -0.67
CDX2-202ENST00000548877 ANXA2P2A6NMY6 339 aa10.89□□□□□ -0.67
CDX2-202ENST00000548877 ZNF878C9JN71 531 aa10.89□□□□□ -0.67
CDX2-202ENST00000548877 TFF1P04155 84 aa10.89□□□□□ -0.67
CDX2-202ENST00000548877 ALDOBP05062 364 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms