RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 NECAP2Q9NVZ3 263 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 E9PLN8 166 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 NQO2P16083 231 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 P2RY4P51582 365 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 ARRDC1Q8N5I2 433 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 OR56B2PQ8NGI1 322 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 RXFP4Q8TDU9 374 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
CACNB3-209ENST00000548860 C2orf16Q68DN1 1984 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 APOC1P02654 83 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 CRYBA1P05813 215 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 ZNF735P0CB33 412 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 SPP1P10451 314 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 PABPC1L2AQ5JQF8 200 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 GCNT2Q8N0V5 402 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 OR52H1Q8NGJ2 320 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 OR10D3Q8NH80 312 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 POC1BQ8TC44 478 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 PSMF1Q92530 271 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 NAT6Q93015 286 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 FOXB1Q99853 325 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 LUZP4Q9P127 313 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 IGKV1-9A0A0C4DH69 117 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 TRIM77I1YAP6 450 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 SIRPB1O00241 398 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 ST8SIA3O43173 380 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 CD1AP06126 327 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 LPAR6P43657 344 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 CYB561P49447 251 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 WDSUB1Q8N9V3 476 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 HES7Q9BYE0 225 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 A0A1B0GTI1 187 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 A0A1W2PRS3 328 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 FGF2P09038 288 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 ARG2P78540 354 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 PJVKQ0ZLH3 352 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 CPT1CQ8TCG5 803 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 SCGB1C1Q8TD33 95 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 B3GAT1Q9P2W7 334 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 FZR1Q9UM11 496 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.42
CACNB3-209ENST00000548860 ATXN7O15265 892 aaPredicted RBP12.4□□□□□ -0.43
CACNB3-209ENST00000548860 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.43
CACNB3-209ENST00000548860 FPR2P25090 351 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 PTGER4P35408 488 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 ACTBL2Q562R1 376 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 SPINK9Q5DT21 86 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 C1orf100Q5SVJ3 147 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 AADACL3Q5VUY0 350 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 LILRB2Q8N423 598 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 OR6X1Q8NH79 312 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 SLC25A43Q8WUT9 341 aaPredicted RBP12.4□□□□□ -0.43
CACNB3-209ENST00000548860 SPSB2Q99619 263 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 HDGFL3Q9Y3E1 203 aa12.4□□□□□ -0.43
CACNB3-209ENST00000548860 HSPB2A8KAH6 182 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 NPIPB7O75200 414 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-209ENST00000548860 EPHA8P29322 1005 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-209ENST00000548860 HSPB2Q16082 182 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 PRSS54Q6PEW0 395 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 VHLLQ6RSH7 139 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 OR1F12Q8NHA8 337 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 CPNE4Q96A23 557 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-209ENST00000548860 KIRREL1Q96J84 757 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 C12orf10Q9HB07 376 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 ABCA4P78363 2273 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 RFPL3SP0C7P2 107 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 CD37P11049 281 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 NKX2-1P43699 371 aaPredicted RBP12.39□□□□□ -0.43
CACNB3-209ENST00000548860 NPBWR2P48146 333 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 MLF1P58340 268 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 RUNX1Q01196 453 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 TMEM164Q5U3C3 297 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 NECAP1Q8NC96 275 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 BCO1Q9HAY6 547 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 ZNF732B4DXR9 585 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 NDUFA6P56556 154 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 RPUSD3Q6P087 351 aaKnown RBP12.39□□□□□ -0.43
CACNB3-209ENST00000548860 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 ANXA10Q9UJ72 324 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 GPR132Q9UNW8 380 aa12.39□□□□□ -0.43
CACNB3-209ENST00000548860 SELEP16581 610 aa12.38□□□□□ -0.43
CACNB3-209ENST00000548860 ACKR3P25106 362 aa12.38□□□□□ -0.43
CACNB3-209ENST00000548860 ARF1P84077 181 aaKnown RBP12.38□□□□□ -0.43
CACNB3-209ENST00000548860 HOGA1Q86XE5 327 aa12.38□□□□□ -0.43
CACNB3-209ENST00000548860 CADM4Q8NFZ8 388 aa12.38□□□□□ -0.43
CACNB3-209ENST00000548860 ERGIC1Q969X5 290 aa12.38□□□□□ -0.43
CACNB3-209ENST00000548860 SHARPINQ9H0F6 387 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms