RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 COPS3Q9UNS2 423 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 SLC22A13Q9Y226 551 aa9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 TBL2Q9Y4P3 447 aaKnown RBP9.6□□□□□ -0.87
TRAFD1-205ENST00000548277 FAM230AA0A1W2PPH8 454 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ODF3BA8MYP8 253 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 J3QT63 122 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 M0R129 80 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ZNF254O75437 659 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 TTRP02766 147 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ZNF728P0DKX0 622 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 IGHV1-8P0DP01 117 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 EPHA2P29317 976 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ACTA2P62736 377 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ACTG2P63267 376 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ACTC1P68032 377 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ACTA1P68133 377 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 CD83Q01151 205 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 BNIP1Q12981 228 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ODF4Q2M2E3 257 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 CLVS2Q5SYC1 327 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ZNF626Q68DY1 528 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 C10orf99Q6UWK7 81 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 MEPCEQ7L2J0 689 aaKnown RBP9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 CALHM1Q8IU99 346 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ZNF679Q8IYX0 411 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 TCEANCQ8N8B7 351 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 WFDC9Q8NEX5 89 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 ASB17Q8WXJ9 295 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 FOXRED1Q96CU9 486 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 KRT84Q9NSB2 600 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 H2AFY2Q9P0M6 372 aaPredicted RBP9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 POLDIP2Q9Y2S7 368 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 TMEM14AQ9Y6G1 99 aa9.59□□□□□ -0.87
TRAFD1-205ENST00000548277 F8VVB4 439 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 F8VWA3 439 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 G3V2T6 193 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 K7N7A8 449 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 DHRS3O75911 302 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 LPLP06858 475 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 CALCBP10092 127 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 RIDAP52758 137 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 ROM1Q03395 351 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 ATP6AP1Q15904 470 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 ZNF829Q3KNS6 432 aaPredicted RBP9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 TCTEX1D4Q5JR98 221 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 C9orf152Q5JTZ5 239 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 KRT74Q7RTS7 529 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 ZNF676Q8N7Q3 588 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 STMN2Q93045 179 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 MYDGFQ969H8 173 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 SLAMF9Q96A28 289 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 IL4I1Q96RQ9 567 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 CNN2Q99439 309 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 APOL4Q9BPW4 351 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 NRIP2Q9BQI9 281 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 PRRG3Q9BZD7 231 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 CHST6Q9GZX3 395 aa9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 KMT2CQ8NEZ4 4911 aaKnown RBP9.58□□□□□ -0.88
TRAFD1-205ENST00000548277 PQLC2LA1A4F0 135 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 FAM172BPA6NC97 362 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 NOS1APO75052 506 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 MMP23AO75900 390 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 CHRM2P08172 466 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 ATP6V1B1P15313 513 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 FASP25445 335 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 SNU13P55769 128 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 CXCR4P61073 352 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 SLC35A2P78381 396 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 EFNB1P98172 346 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 CD69Q07108 199 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 ABCA11PQ4W5N1 156 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 AADACL4Q5VUY2 407 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 SLX4IPQ5VYV7 408 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 NXNL2Q5VZ03 156 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 KDM4DQ6B0I6 523 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 ZNF322Q6U7Q0 402 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 BAIAP2L2Q6UXY1 529 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 AMIGO2Q86SJ2 522 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 SLC35F2Q8IXU6 374 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 OR11H6Q8NGC7 330 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 TMEM163Q8TC26 289 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 ZNF714Q96N38 554 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 ADGRL4Q9HBW9 690 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 NUFIP1Q9UHK0 495 aaKnown RBP9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 AP4S1Q9Y587 144 aa9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 TSSC4Q9Y5U2 329 aaPredicted RBP9.57□□□□□ -0.88
TRAFD1-205ENST00000548277 TMEM82A0PJX8 343 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 ZAR1LA6NP61 321 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 LOC110117498-PIK3R3F6TDL0 507 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 SRSF10O75494 262 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 RPP14O95059 124 aaKnown RBP9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 IGLV3-1P01715 115 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 IGHA1P01876 353 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 ALDOBP05062 364 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 CCDC159P0C7I6 412 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 DUSP1P28562 367 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 RASSF2P50749 326 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 ACTR3P61158 418 aa9.56□□□□□ -0.88
TRAFD1-205ENST00000548277 C1orf146Q5VVC0 180 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms