RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 RPL22L1Q6P5R6 122 aaKnown RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 FIP1L1Q6UN15 594 aaKnown RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 BATF2Q8N1L9 274 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 OR13C9Q8NGT0 318 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 SLAMF9Q96A28 289 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 ZCCHC4Q9H5U6 513 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 UNKLQ9H9P5 680 aaKnown RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 SEBOXQ9HB31 216 aaPredicted RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 ELL3Q9HB65 397 aaPredicted RBP13.07□□□□□ -0.32
DDX54-204ENST00000546898 DHDHQ9UQ10 334 aa13.07□□□□□ -0.32
DDX54-204ENST00000546898 TRBV2A0A0J9YWF9 115 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 A0A1W2PPH5 198 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 CHRM2P08172 466 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 PIPP12273 146 aaPredicted RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 POU3F4P49335 361 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 CEBPDP49716 269 aaPredicted RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 ETV1P50549 477 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 CDK5R1Q15078 307 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 NCR3LG1Q68D85 454 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 C12orf54Q6X4T0 127 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 SERPINA12Q8IW75 414 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 PARP16Q8N5Y8 322 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 Q8N7P7 452 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 OR5D14Q8NGL3 314 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 TBC1D15Q8TC07 691 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 RPS4Y2Q8TD47 263 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 TSEN15Q8WW01 171 aaKnown RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 EMG1Q92979 244 aaKnown RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 METTL8Q9H825 291 aaKnown RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
DDX54-204ENST00000546898 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 SOX21Q9Y651 276 aaPredicted RBP13.06□□□□□ -0.32
DDX54-204ENST00000546898 TENM1Q9UKZ4 2725 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 F8VVB4 439 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 F8VWA3 439 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 SULT1B1O43704 296 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 TK1P04183 234 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 GTF2A1P52655 376 aaPredicted RBP13.05□□□□□ -0.32
DDX54-204ENST00000546898 RPL31P62899 125 aaKnown RBP13.05□□□□□ -0.32
DDX54-204ENST00000546898 SLC34A1Q06495 639 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 SLC9A3R2Q15599 337 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 TMEM86BQ8N661 226 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 OR5D13Q8NGL4 314 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 OR52N1Q8NH53 320 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 FBLIM1Q8WUP2 373 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
DDX54-204ENST00000546898 CPNE2Q96FN4 548 aaPredicted RBP13.05□□□□□ -0.32
DDX54-204ENST00000546898 RHOFQ9HBH0 211 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 C19orf12Q9NSK7 152 aa13.05□□□□□ -0.32
DDX54-204ENST00000546898 CNOT2Q9NZN8 540 aaKnown RBP13.05□□□□□ -0.32
DDX54-204ENST00000546898 EFCAB10A6NFE3 127 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 K7N7A8 449 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 HOXA3O43365 443 aaPredicted RBP13.04□□□□□ -0.32
DDX54-204ENST00000546898 ZNF737O75373 536 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 CD2P06729 351 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 GNAO1P09471 354 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 HKR1P10072 659 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 EEF1B2P24534 225 aaKnown RBP13.04□□□□□ -0.32
DDX54-204ENST00000546898 COL10A1Q03692 680 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 PDZK1IP1Q13113 114 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 OR2G6Q5TZ20 316 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 Q6YL49 198 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 FAM58AQ8N1B3 248 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 ASCC1Q8N9N2 400 aaKnown RBP13.04□□□□□ -0.32
DDX54-204ENST00000546898 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 GGHQ92820 318 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 TNFRSF14Q92956 283 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 SMIM19Q96E16 107 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 DUX5Q96PT3 197 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 PLCXD1Q9NUJ7 323 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 BABAM2Q9NXR7 383 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 POMT1Q9Y6A1 747 aa13.04□□□□□ -0.32
DDX54-204ENST00000546898 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 H0YJX3 145 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 SPRY1O43609 319 aaPredicted RBP13.03□□□□□ -0.32
DDX54-204ENST00000546898 INMTO95050 263 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 MELTFP08582 738 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 HCKP08631 526 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 BCL3P20749 454 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 NPBWR2P48146 333 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 UBE2E1P51965 193 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 ST3GAL4Q11206 333 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 ZNF146Q15072 292 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 XAF1Q6GPH4 301 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 LDLRAD3Q86YD5 345 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 PDZD9Q8IXQ8 264 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 SAXO1Q8IYX7 474 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 OR8H2Q8N162 312 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 ZSCAN4Q8NAM6 433 aaPredicted RBP13.03□□□□□ -0.32
DDX54-204ENST00000546898 RGP1Q92546 391 aaPredicted RBP13.03□□□□□ -0.32
DDX54-204ENST00000546898 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
DDX54-204ENST00000546898 SNX22Q96L94 193 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms