RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SLC35B1P78383 322 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 IL5RAQ01344 420 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 ENDOGQ14249 297 aaKnown RBP1.2□□□□□ -2.22
CCDC38-204ENST00000546816 TOMM34Q15785 309 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-204ENST00000546816 ATP6V1FQ16864 119 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 CDNFQ49AH0 187 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 C16orf87Q6PH81 154 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 VTCN1Q7Z7D3 282 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 EIF4E3Q8N5X7 224 aaKnown RBP1.2□□□□□ -2.22
CCDC38-204ENST00000546816 FBXO36Q8NEA4 188 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 BPIFB6Q8NFQ5 453 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 ITLN2Q8WWU7 325 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-204ENST00000546816 TNFRSF14Q92956 283 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 OTUB2Q96DC9 234 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 DERL3Q96Q80 235 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 C20orf144Q9BQM9 153 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 TSGA10Q9BZW7 698 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 DSN1Q9H410 356 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 TMEM106BQ9NUM4 274 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 ACOT9Q9Y305 439 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 ENPP4Q9Y6X5 453 aa1.2□□□□□ -2.22
CCDC38-204ENST00000546816 BRD4O60885 1362 aaPredicted RBP1.2□□□□□ -2.22
CCDC38-204ENST00000546816 DYSFO75923 2080 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 IGKV1OR2-108A0A075B7D4 117 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 LOC100653049A0A140TA62 436 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 SDHAF1A6NFY7 115 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 GGTLC3B5MD39 225 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 GMDSO60547 372 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 KRT34O76011 436 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 ETHE1O95571 254 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 CRYGCP07315 174 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 SEC11BP0C7V7 166 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 ZNF708P17019 499 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 CPN2P22792 545 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 SLC6A1P30531 599 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 HTR2BP41595 481 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 TUFMP49411 452 aaKnown RBP1.19□□□□□ -2.22
CCDC38-204ENST00000546816 PSMB2P49721 201 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 TAS2R60P59551 318 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 RPL31P62899 125 aaKnown RBP1.19□□□□□ -2.22
CCDC38-204ENST00000546816 NKAIN1Q4KMZ8 207 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 TTC32Q5I0X7 151 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 FAM27D1Q5T7N8 215 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 KCTD16Q68DU8 428 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 CLEC18BQ6UXF7 455 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 TMEM144Q7Z5S9 345 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 PRNTQ86SH4 94 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 SETD3Q86TU7 594 aaPredicted RBP1.19□□□□□ -2.22
CCDC38-204ENST00000546816 ZDHHC22Q8N966 263 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 FAM184AQ8NB25 1140 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 ZNF555Q8NEP9 628 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 OR51L1Q8NGJ5 315 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 OR5H2Q8NGV7 314 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 OR51A7Q8NH64 312 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 ING5Q8WYH8 240 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 KIAA1143Q96AT1 154 aaPredicted RBP1.19□□□□□ -2.22
CCDC38-204ENST00000546816 ZNF75AQ96N20 296 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 C20orf166-AS1Q96NR2 134 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 BCL7BQ9BQE9 202 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 CHID1Q9BWS9 393 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 SLC7A11Q9UPY5 501 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 CFL2Q9Y281 166 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 KPTNQ9Y664 436 aa1.19□□□□□ -2.22
CCDC38-204ENST00000546816 KIF27Q86VH2 1401 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 FAM240AA0A1B0GVK7 77 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 A0A1W2PNM2 257 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 A0A1W2PPV4 95 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 H7C2Y5 167 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 M0R1B8 84 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 GATCO43716 136 aaKnown RBP1.18□□□□□ -2.22
CCDC38-204ENST00000546816 KDELR3O43731 214 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 ALOX12BO75342 701 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 CXorf1O96002 111 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 IGHMP01871 453 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 PRB1P04280 392 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 CTSGP08311 255 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 P2RY2P41231 377 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 LAMTOR4Q0VGL1 99 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 PMVKQ15126 192 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 LGALSLQ3ZCW2 172 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-204ENST00000546816 CLLU1OSQ5K130 101 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 CLEC19AQ6UXS0 136 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 ITPRIPQ8IWB1 547 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 OR4K2Q8NGD2 314 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 NT5CQ8TCD5 201 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 CENPNQ96H22 339 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-204ENST00000546816 PPP1R36Q96LQ0 422 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 THTPAQ9BU02 230 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 TMED9Q9BVK6 235 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 COA1Q9GZY4 146 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 C6orf50Q9HD87 102 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 TMEM38BQ9NVV0 291 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 DDIT4Q9NX09 232 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 PRO0628Q9UI54 55 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 KLF13Q9Y2Y9 288 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-204ENST00000546816 ORC6Q9Y5N6 252 aa1.18□□□□□ -2.22
CCDC38-204ENST00000546816 A0A0J9YYE9 177 aa1.17□□□□□ -2.22
CCDC38-204ENST00000546816 ANKRD20A5PA0PJZ0 165 aa1.17□□□□□ -2.22
CCDC38-204ENST00000546816 LEUTXA8MZ59 168 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms