RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 MVB12AQ96EY5 273 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 ZNF581Q9P0T4 197 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 CLDN16Q9Y5I7 305 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 SLC25A4P12235 298 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 BMP5P22003 454 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 SFT2D1Q8WV19 159 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 ISOC2Q96AB3 205 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 WASF3Q9UPY6 502 aa8.61□□□□□ -1.03
TRAF1-203ENST00000546084 A0A1W2PR77 199 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 SYNGR4O95473 234 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 PTGFRP43088 359 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 GPM6AP51674 278 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 GNMTQ14749 295 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 HFEQ30201 348 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 ADAM5Q6NVV9 412 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 ZNF561Q8N587 486 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 EXD3Q8N9H8 876 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 LRRC75AQ8NAA5 344 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 AKR1E2Q96JD6 320 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 OXGR1Q96P68 337 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 OPN3Q9H1Y3 402 aaPredicted RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 LHFPL6Q9Y693 200 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 CCDC187A0A096LP49 1063 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 GEMIN2O14893 280 aaKnown RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 EFNA2O43921 213 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 CDC14BO60729 498 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 DXOO77932 396 aaKnown RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 DUS4LO95620 317 aaKnown RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 SFTA3P0C7M3 94 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 ZNF728P0DKX0 622 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 SELEP16581 610 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 ADCYAP1P18509 176 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 ADH6P28332 368 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 EIF5AP63241 154 aaKnown RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 PJVKQ0ZLH3 352 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 MALLQ13021 153 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 IZUMO4Q1ZYL8 232 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 COL13A1Q5TAT6 717 aaPredicted RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 CLEC18BQ6UXF7 455 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 DEFB123Q8N688 67 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 NKAIN3Q8N8D7 197 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 OR11L1Q8NGX0 322 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 SCGB3A2Q96PL1 93 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 METTL9Q9H1A3 318 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 BARX1Q9HBU1 254 aaPredicted RBP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 DNAJB11Q9UBS4 358 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 KIAA1549LQ6ZVL6 1849 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRAF1-203ENST00000546084 A0A1B0GTQ1 180 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 MSGN1A6NI15 193 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 ZNF735P0CB33 412 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 RAB4AP20338 218 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 CYB561P49447 251 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 RAB4BP61018 213 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 UNC119Q13432 240 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 TGIF1Q15583 401 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 DRAM2Q6UX65 266 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 NAT6Q93015 286 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 OR5AC2Q9NZP5 309 aa8.6□□□□□ -1.03
TRAF1-203ENST00000546084 A0A0G2JMM0 328 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 A0A0J9YW62 118 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 A0A1B0GTI1 187 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 A0A1W2PPB8 328 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 A0A1W2PRS3 328 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 KIR3DP1A8MWS1 328 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 NRASP01111 189 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 HIST1H1DP16402 221 aaKnown RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 S100A7P31151 101 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 TAS2R31P59538 309 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 HAGHQ16775 308 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 SNAI3Q3KNW1 292 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 ETV3LQ6ZN32 361 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 TMEM182Q6ZP80 229 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 ZSCAN4Q8NAM6 433 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 RPS4Y2Q8TD47 263 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 GLYATL2Q8WU03 294 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 MRGPRX4Q96LA9 322 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 WNT5BQ9H1J7 359 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 AMDHD2Q9Y303 409 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 RNASEK-C17orf49H0YIS7 233 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 WDR1O75083 606 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 S100A8P05109 93 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 MUC1P15941 1255 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 EPHA8P29322 1005 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 IDH3GP51553 393 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 ZNF674Q2M3X9 581 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 TMEM128Q5BJH2 165 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 ATP1A1-AS1Q5TC04 95 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 ASPHD2Q6ICH7 369 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 Q6ZRG5 221 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 DOK3Q7L591 496 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 RTN4IP1Q8WWV3 396 aaPredicted RBP8.59□□□□□ -1.03
TRAF1-203ENST00000546084 SDSLQ96GA7 329 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 PIGQQ9BRB3 760 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 FLVCR1Q9Y5Y0 555 aa8.59□□□□□ -1.03
TRAF1-203ENST00000546084 PRR19A6NJB7 356 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms