RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 NDUFA2O43678 99 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 CDC14BO60729 498 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 KNG1P01042 644 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 IGKV1D-12P01611 117 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 GLAP06280 429 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 MGMTP16455 207 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 TMEM33P57088 247 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 RPS27AP62979 156 aaKnown RBP13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 ZNF146Q15072 292 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 P2RY14Q15391 338 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 SLC22A6Q4U2R8 563 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 PEG10Q86TG7 708 aaKnown RBP13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 FAM58AQ8N1B3 248 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 LRRC75A-AS1Q8N1F1 130 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 FAM89BQ8N5H3 189 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 GCSAMQ8N6F7 178 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 OR56B1Q8NGI3 324 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 LRRC29Q8WV35 223 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 PHF21AQ96BD5 680 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 C6orf62Q9GZU0 229 aaPredicted RBP13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 CHODLQ9H9P2 273 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 TMEM106BQ9NUM4 274 aa13.5□□□□□ -0.25
PRPF40A-212ENST00000545856 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 ANGPTL7O43827 346 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 CRTAPO75718 401 aaPredicted RBP13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 NXPH2O95156 264 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 HPXP02790 462 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 SNRPBP14678 240 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 GLRA1P23415 457 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 COL8A1P27658 744 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 TALDO1P37837 337 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 NR4A2P43354 598 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 CLDN12P56749 244 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 UNC119Q13432 240 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 DMRTC1Q5HYR2 192 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 TEX36Q5VZQ5 186 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 METAP1DQ6UB28 335 aaPredicted RBP13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 C1QL2Q7Z5L3 287 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 SAMD12Q8N8I0 201 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 CHST4Q8NCG5 386 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 EMG1Q92979 244 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 FAM46BQ96A09 425 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 SLAMF9Q96A28 289 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 MBD6Q96DN6 1003 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 S100A16Q96FQ6 103 aaKnown RBP13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 TIMD4Q96H15 378 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 Q96M66 194 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 UFSP2Q9NUQ7 469 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 COMMD3Q9UBI1 195 aa13.49□□□□□ -0.25
PRPF40A-212ENST00000545856 TRAV38-1A0A0B4J264 116 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 CLDN25C9JDP6 229 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 NDUFS8O00217 210 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 RP2O75695 350 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 RHBDL1O75783 438 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 HTR3BO95264 441 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 PLATP00750 562 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 SFTPBP07988 381 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 DAOP14920 347 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 BCL3P20749 454 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 SERPINA2P20848 420 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 PMELP40967 661 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 MNDAP41218 407 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 RBM11P57052 281 aaKnown RBP13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 DSCR9P59020 149 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 MICBQ29980 383 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 ACP7Q6ZNF0 438 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 ZCCHC24Q8N2G6 241 aaKnown RBP13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 MUC20Q8N307 709 aaPredicted RBP13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 DIABLOQ9NR28 239 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 ITPR2Q14571 2701 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 POLQO75417 2590 aa13.48□□□□□ -0.25
PRPF40A-212ENST00000545856 OOEPA6NGQ2 149 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 POM121CA8CG34 1229 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 LGALS8O00214 317 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 RGS5O15539 181 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 MPIG6BO95866 241 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 PAHP00439 452 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 DNASE1P24855 282 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 ETV6P41212 452 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 KCNJ3P48549 501 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 RNF144BQ7Z419 303 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 OR6Q1Q8NGQ2 317 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 GAL3ST1Q99999 423 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 LPAR5Q9H1C0 372 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 HSF4Q9ULV5 492 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 ST3GAL6Q9Y274 331 aa13.47□□□□□ -0.25
PRPF40A-212ENST00000545856 PPIAL4EA0A075B759 164 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 PPIAL4DF5H284 164 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 PPIAL4FP0DN26 164 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 PRKACAP17612 351 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 CDKN1AP38936 164 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 NPBWR2P48146 333 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 TMEM104Q8NE00 496 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 S100ZQ8WXG8 99 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 CCL17Q92583 94 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 RAB1CQ92928 201 aa13.46□□□□□ -0.25
PRPF40A-212ENST00000545856 SLC25A38Q96DW6 304 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms