RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 CCL13Q99616 98 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 KRTAP4-6Q9BYQ5 205 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 PLEKHA1Q9HB21 404 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 NOX4Q9NPH5 578 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 NLKQ9UBE8 527 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 DUX4Q9UBX2 424 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 SLC25A10Q9UBX3 287 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF222Q9UK12 451 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 POLDIP2Q9Y2S7 368 aa6.32□□□□□ -1.4
SNHG1-223ENST00000545440 IGKV1D-17A0A075B6S4 117 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 IGHV1-69DA0A0B4J2H0 117 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 CENPVL3A0A0U1RRI6 287 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 A0A1B0GTI1 187 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 MDFIC2A0A1B0GVS7 189 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 PQLC2LA1A4F0 135 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 ANKRD61A6NGH8 418 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 METTL15A6NJ78 407 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SNTNA6NMZ2 147 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 EBAG9O00559 213 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 MAGEB4O15481 346 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 RPP14O95059 124 aaKnown RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 IGHV1-69P01742 117 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 ACAA1P09110 424 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 UBCP0CG48 685 aaKnown RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 PGA5P0DJD9 388 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SELLP14151 372 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 MPZP25189 248 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 ATP6V1E1P36543 226 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 GMFBP60983 142 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 ISL1P61371 349 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 ELF3P78545 371 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SLC9A3R2Q15599 337 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 DGUOKQ16854 277 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 MEDAGQ5VYS4 303 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 RUSC1-AS1Q66K80 236 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 LCNL1Q6ZST4 164 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 MOB3CQ70IA8 216 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 VMO1Q7Z5L0 202 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 CATSPERDQ86XM0 798 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 FGFRL1Q8N441 504 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 TMEM86BQ8N661 226 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 C3orf56Q8N813 242 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 POC1AQ8NBT0 407 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 OR5T2Q8NGG2 359 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 TBC1D15Q8TC07 691 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 RORBQ92753 470 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 C10orf35Q96D05 121 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 MED30Q96HR3 178 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 DUX5Q96PT3 197 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 TBX5Q99593 518 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 DCTN5Q9BTE1 182 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 CHST5Q9GZS9 411 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SNTG1Q9NSN8 517 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 ACOXLQ9NUZ1 547 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 AURKAIP1Q9NWT8 199 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-223ENST00000545440 RASL12Q9NYN1 266 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 SLC22A13Q9Y226 551 aa6.31□□□□□ -1.4
SNHG1-223ENST00000545440 LOC107986453A0A1B0GWG9 222 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 DIRC3C9JPN6 131 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 J3QRE1 110 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 M0R1W7 72 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 SYT7O43581 403 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 MPZL2O60487 215 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 NOS1APO75052 506 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-223ENST00000545440 PEX14O75381 377 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 GATBO75879 557 aaKnown RBP6.3□□□□□ -1.4
SNHG1-223ENST00000545440 PSG2P11465 335 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 HAAOP46952 286 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 RPL15P61313 204 aaKnown RBP6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ARF6P62330 175 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ACTA2P62736 377 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ACTG2P63267 376 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF85Q03923 595 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 RAB32Q13637 225 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 DEFB112Q30KQ8 113 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 DMRTC1Q5HYR2 192 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 NCR3LG1Q68D85 454 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 Q6YL49 198 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ACP7Q6ZNF0 438 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 LDLRAD3Q86YD5 345 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 PRSS35Q8N3Z0 413 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 CBR4Q8N4T8 237 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ZNF561Q8N587 486 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 H1FXQ92522 213 aaKnown RBP6.3□□□□□ -1.4
SNHG1-223ENST00000545440 LHX4Q969G2 390 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 RNFT2Q96EX2 444 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 SDSLQ96GA7 329 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 NRIP2Q9BQI9 281 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 C9orf16Q9BUW7 83 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 PKIBQ9C010 78 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 UNKLQ9H9P5 680 aaKnown RBP6.3□□□□□ -1.4
SNHG1-223ENST00000545440 HES4Q9HCC6 221 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 GPR173Q9NS66 373 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 ONECUT1Q9UBC0 465 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 SLC23A1Q9UHI7 598 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 GNG8Q9UK08 70 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 PCDHGB1Q9Y5G3 927 aa6.3□□□□□ -1.4
SNHG1-223ENST00000545440 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms