RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 RCL1Q9Y2P8 373 aaKnown RBP5.11□□□□□ -1.59
VPS50-220ENST00000544910 IGHV1-45A0A0A0MS14 117 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CCDC163A0A0D9SF12 145 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CLPSP04118 112 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SRD5A2P31213 254 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CCKARP32238 428 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OPRM1P35372 400 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 GABRA2P47869 451 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 FOXL2P58012 376 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 DHODHQ02127 395 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CATR1Q13166 79 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CEACAM16Q2WEN9 425 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SLC16A13Q7RTY0 426 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OR5AP2Q8NGF4 316 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 MS4A3Q96HJ5 214 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SUCNR1Q9BXA5 334 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SEC11CQ9BY50 192 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 PARD6AQ9NPB6 346 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 MIOXQ9UGB7 285 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 PCM1Q15154 2024 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 NUP214P35658 2090 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 FAM221AA4D161 298 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 FIGNL2A6NMB9 653 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 RAB27BO00194 218 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 HS3ST1O14792 307 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 DEGS1O15121 323 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 GP1BAP07359 652 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 LIFP15018 202 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SELEP16581 610 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 LIMK1P53667 647 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 INPP5JQ15735 1006 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 MICBQ29980 383 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 ZNF260Q3ZCT1 412 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 C1orf100Q5SVJ3 147 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 DCAF12L2Q5VW00 463 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 LAMTOR1Q6IAA8 161 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 ETFRF1Q6IPR1 90 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 PRSS54Q6PEW0 395 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 C6orf201Q7Z4U5 140 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OR13D1Q8NGV5 346 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OR10J5Q8NHC4 309 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SAT2Q96F10 170 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 NPAS1Q99742 590 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 NPDC1Q9NQX5 325 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 A0A096LPE4 126 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 A0A1W2PPZ6 126 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 TERTO14746 1132 aaKnown RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 LMX1BO60663 402 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 HPP00738 406 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CST4P01036 141 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 RRADP55042 308 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 STARD6P59095 220 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 PPIAP62937 165 aaKnown RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 SLC25A45Q8N413 288 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 ZNF611Q8N823 705 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 TMEM178AQ8NBL3 297 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 AKR1E2Q96JD6 320 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 FAM173AQ9BQD7 235 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OR14J1Q9UGF5 321 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 G3V3Q6 166 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 TNFSF12O43508 249 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 TRAF3IP2O43734 574 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 MGST1P10620 155 aaKnown RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 NKX2-1P43699 371 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 FOXK1P85037 733 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 BAXQ07812 192 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SSPNQ14714 243 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SURF2Q15527 256 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 C4orf17Q53FE4 359 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 WIPI1Q5MNZ9 446 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 JMJD6Q6NYC1 403 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 SLC25A47Q6Q0C1 308 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CLEC18BQ6UXF7 455 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OVCH2Q7RTZ1 564 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 PPP1R35Q8TAP8 253 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 NOL4LQ96MY1 436 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 SLC35D1Q9NTN3 355 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 TNFSF18Q9UNG2 199 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 YTHDF2Q9Y5A9 579 aaKnown RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 TMEM265A0A087WTH1 108 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 GLAP06280 429 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 ACKR3P25106 362 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 HAAOP46952 286 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 GPM6AP51674 278 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 TMEM268Q5VZI3 342 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 NCR3LG1Q68D85 454 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 CNEP1R1Q8N9A8 125 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 SUMF1Q8NBK3 374 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OR10D3Q8NH80 312 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 OR2AE1Q8NHA4 323 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 ZNF596Q8TC21 504 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 GFI1Q99684 422 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 NUDT16L1Q9BRJ7 211 aaKnown RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 B3GAT1Q9P2W7 334 aa5.1□□□□□ -1.59
VPS50-220ENST00000544910 KLF13Q9Y2Y9 288 aaPredicted RBP5.1□□□□□ -1.59
VPS50-220ENST00000544910 TCF20Q9UGU0 1960 aaKnown RBP5.09□□□□□ -1.59
VPS50-220ENST00000544910 MFSD2BA6NFX1 497 aa5.09□□□□□ -1.59
VPS50-220ENST00000544910 CLN5O75503 358 aa5.09□□□□□ -1.59
VPS50-220ENST00000544910 CCL3P10147 92 aa5.09□□□□□ -1.59
VPS50-220ENST00000544910 ZNF32P17041 273 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms