RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ABCB10Q9NRK6 738 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 LAMP5Q9UJQ1 280 aa10.27□□□□□ -0.77
USP28-212ENST00000544750 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.77
USP28-212ENST00000544750 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 RFPL4AA6NLU0 287 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 RFPL4AL1F8VTS6 287 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 SRSF10O75494 262 aaKnown RBP10.26□□□□□ -0.77
USP28-212ENST00000544750 ALDOBP05062 364 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 CAPZA1P52907 286 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 ROM1Q03395 351 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 ZIK1Q3SY52 487 aaPredicted RBP10.26□□□□□ -0.77
USP28-212ENST00000544750 SSX6Q7RTT6 188 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 SLC35F2Q8IXU6 374 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 ZNF561Q8N587 486 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 OR4M1Q8NGD0 313 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 OR8B12Q8NGG6 310 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 OR8J1Q8NGP2 316 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 OR2T27Q8NH04 317 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 FAM81AQ8TBF8 368 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 MYDGFQ969H8 173 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 EME1Q96AY2 570 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 PGAM5Q96HS1 289 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 OR8B4Q96RC9 309 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 BRD7Q9NPI1 651 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 FAM206AQ9NX38 181 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 RASL12Q9NYN1 266 aa10.26□□□□□ -0.77
USP28-212ENST00000544750 hCG_1809904A0A1W2PP81 198 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 A0A1W2PPE2 198 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 A0A1W2PR64 198 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 A0A1W2PRV1 198 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 TCRBV4S1A1TA0A5B7 111 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 ZNF732B4DXR9 585 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 ANKRD65E5RJM6 399 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 F2RL2O00254 374 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 DLGAP1O14490 977 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 MAGEB4O15481 346 aaPredicted RBP10.25□□□□□ -0.77
USP28-212ENST00000544750 ARG1P05089 322 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 HTR1FP30939 366 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 GNG3P63215 75 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 CEACAM21Q3KPI0 293 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 ARSJQ5FYB0 599 aaPredicted RBP10.25□□□□□ -0.77
USP28-212ENST00000544750 DEGS2Q6QHC5 323 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 C10orf99Q6UWK7 81 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 ETV3LQ6ZN32 361 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 KRT77Q7Z794 578 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.25□□□□□ -0.77
USP28-212ENST00000544750 ZNF679Q8IYX0 411 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 ZNF671Q8TAW3 534 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 C9orf16Q9BUW7 83 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 NIPAL2Q9H841 368 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 CLN6Q9NWW5 311 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 WARS2Q9UGM6 360 aaKnown RBP10.25□□□□□ -0.77
USP28-212ENST00000544750 KIAA2026Q5HYC2 2103 aa10.25□□□□□ -0.77
USP28-212ENST00000544750 APOL3O95236 402 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 IGLV3-1P01715 115 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 RBP4P02753 201 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 NHLRC4P0CG21 123 aaPredicted RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 GABRB1P18505 474 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 AZGP1P25311 298 aaKnown RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 PRDX2P32119 198 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 CEBPDP49716 269 aaPredicted RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 CDC42P60953 191 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 CXCR4P61073 352 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 DMRTC1Q5HYR2 192 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 KCTD18Q6PI47 426 aaPredicted RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 POC1AQ8NBT0 407 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 OR13D1Q8NGV5 346 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 ASB17Q8WXJ9 295 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 MNTQ99583 582 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 APOL4Q9BPW4 351 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 H2AFY2Q9P0M6 372 aaPredicted RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 AASSQ9UDR5 926 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 MRM2Q9UI43 246 aaKnown RBP10.24□□□□□ -0.77
USP28-212ENST00000544750 ORC6Q9Y5N6 252 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 TMEM14AQ9Y6G1 99 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 U3KQK5 164 aa10.24□□□□□ -0.77
USP28-212ENST00000544750 OR5B21A6NL26 309 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 C3orf84H3BNL1 204 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 SLC1A7O00341 560 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 NOS1APO75052 506 aaPredicted RBP10.23□□□□□ -0.77
USP28-212ENST00000544750 ENTPD6O75354 484 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 ZNF254O75437 659 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 BAG2O95816 211 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 TK1P04183 234 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 PGA5P0DJD9 388 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 SNRPGP62308 76 aaKnown RBP10.23□□□□□ -0.77
USP28-212ENST00000544750 DCTN2Q13561 401 aaKnown RBP10.23□□□□□ -0.77
USP28-212ENST00000544750 ZSCAN26Q16670 478 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 CEP78Q5JTW2 689 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 NKAPLQ5M9Q1 402 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 SLC25A30Q5SVS4 291 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 ZNF684Q5T5D7 378 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 HAGHLQ6PII5 290 aaPredicted RBP10.23□□□□□ -0.77
USP28-212ENST00000544750 ZNF322Q6U7Q0 402 aaPredicted RBP10.23□□□□□ -0.77
USP28-212ENST00000544750 ZBTB49Q6ZSB9 765 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 RNF144BQ7Z419 303 aa10.23□□□□□ -0.77
USP28-212ENST00000544750 CENPVQ7Z7K6 275 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms