RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 HNF1AP20823 631 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 NPBWR2P48146 333 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 IL13RA1P78552 427 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 CD276Q5ZPR3 534 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 UNQ9370/PRO34162Q6UXP9 181 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 Q8IYB0 196 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 CD177Q8N6Q3 437 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 ZSCAN4Q8NAM6 433 aaPredicted RBP15.84■□□□□ 0.13
DDX55-211ENST00000544429 LY6G5BQ8NDX9 201 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 ORAI1Q96D31 301 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 MED30Q96HR3 178 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 NEK6Q9HC98 313 aa15.84■□□□□ 0.13
DDX55-211ENST00000544429 DSCAML1Q8TD84 2053 aa15.83■□□□□ 0.13
DDX55-211ENST00000544429 TRAV8-7A0A075B6U6 113 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 NKX6-3A6NJ46 265 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 SPRY1O43609 319 aaPredicted RBP15.83■□□□□ 0.12
DDX55-211ENST00000544429 KDM4BO94953 1096 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 ECDO95905 644 aaPredicted RBP15.83■□□□□ 0.12
DDX55-211ENST00000544429 PLATP00750 562 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 MAP2K4P45985 399 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 CAV3P56539 151 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 MLLT11Q13015 90 aaPredicted RBP15.83■□□□□ 0.12
DDX55-211ENST00000544429 MS4A15Q8N5U1 240 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 OR52N4Q8NGI2 321 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 C8orf46Q8TAG6 207 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 RFT1Q96AA3 541 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 DMRTB1Q96MA1 342 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 NUDT16L1Q9BRJ7 211 aaKnown RBP15.83■□□□□ 0.12
DDX55-211ENST00000544429 CCDC90BQ9GZT6 254 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 C7orf69Q9H7B7 122 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 RHOFQ9HBH0 211 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 TMEM138Q9NPI0 162 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 ACOT13Q9NPJ3 140 aa15.83■□□□□ 0.12
DDX55-211ENST00000544429 NDUFB3O43676 98 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 ENSAO43768 121 aaKnown RBP15.82■□□□□ 0.12
DDX55-211ENST00000544429 HCKP08631 526 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 OCMP0CE72 109 aaPredicted RBP15.82■□□□□ 0.12
DDX55-211ENST00000544429 CPEP16870 476 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 BCL3P20749 454 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 PRDX2P32119 198 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 POU3F4P49335 361 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 GP2P55259 537 aaKnown RBP15.82■□□□□ 0.12
DDX55-211ENST00000544429 ASCL4Q6XD76 172 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 BTN2A1Q7KYR7 527 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 C1QL2Q7Z5L3 287 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 PRIMA1Q86XR5 153 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 LYPD6Q86Y78 171 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 BATF2Q8N1L9 274 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 ZNRF1Q8ND25 227 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 Q8NFD4 153 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 THRSPQ92748 146 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 RBFOX1Q9NWB1 397 aaKnown RBP15.82■□□□□ 0.12
DDX55-211ENST00000544429 RPUSD1Q9UJJ7 312 aaKnown RBP15.82■□□□□ 0.12
DDX55-211ENST00000544429 FOXJ3Q9UPW0 622 aa15.82■□□□□ 0.12
DDX55-211ENST00000544429 SF3B6Q9Y3B4 125 aaKnown RBP15.82■□□□□ 0.12
DDX55-211ENST00000544429 MAGEA13PA6NCF6 341 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 GABRPO00591 440 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 ANGPTL7O43827 346 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 LIPFP07098 398 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 SFTPBP07988 381 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 SRD5A1P18405 259 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 EEF1B2P24534 225 aaKnown RBP15.81■□□□□ 0.12
DDX55-211ENST00000544429 EMX1Q04741 257 aaPredicted RBP15.81■□□□□ 0.12
DDX55-211ENST00000544429 IKZF1Q13422 519 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 ZNF146Q15072 292 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 TUSC1Q2TAM9 212 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 LRRC10Q5BKY1 277 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 ZNF561Q8N587 486 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 TEX29Q8N6K0 151 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 PXT1Q8NFP0 134 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 OR5D18Q8NGL1 313 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 CPNE2Q96FN4 548 aaPredicted RBP15.81■□□□□ 0.12
DDX55-211ENST00000544429 MGLLQ99685 303 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 DCTN5Q9BTE1 182 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 HMG20AQ9NP66 347 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 IL36RNQ9UBH0 155 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 SLC25A10Q9UBX3 287 aaPredicted RBP15.81■□□□□ 0.12
DDX55-211ENST00000544429 METRNQ9UJH8 293 aa15.81■□□□□ 0.12
DDX55-211ENST00000544429 ZNF737O75373 536 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 CYB5AP00167 134 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 MMP9P14780 707 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 MAPK3P27361 379 aaPredicted RBP15.8■□□□□ 0.12
DDX55-211ENST00000544429 BDKRB2P30411 391 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 TGFBR2P37173 567 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 GABRA2P47869 451 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 CEBPDP49716 269 aaPredicted RBP15.8■□□□□ 0.12
DDX55-211ENST00000544429 PPP3R1P63098 170 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 INSL4Q14641 139 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 ACSM3Q53FZ2 586 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 LIPKQ5VXJ0 399 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 ELP2Q6IA86 826 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 BTNL3Q6UXE8 466 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 ZNF367Q7RTV3 350 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 PHC2Q8IXK0 858 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 SPARTQ8N0X7 666 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 FAM58AQ8N1B3 248 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 ST8SIA4Q92187 359 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 UFD1Q92890 307 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 UPRTQ96BW1 309 aa15.8■□□□□ 0.12
DDX55-211ENST00000544429 NOX4Q9NPH5 578 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms